| Ioannis Koltsidas, Heiko Müller, Stratis Viglas, Sorting hierarchical data in external memory for archiving, Proceedings of the VLDB Endowment, Volume 1 , Issue 1, August 2008 |
| Wenfei Fan, Floris Geerts, Shuai Ma, Heiko Müller, Detecting Inconsistencies in Distributed Data, 26th IEEE International Conference on Data Engineering, March 1-6, 2010, Long Beach, California, USA |
| Heiko Müller, Felix Naumann, Johann-Christoph Freytag, Data Quality in Genome Databases, Proceedings of the Conference on Information Quality (IQ 03), Boston |
| Heiko Müller, Johann-Christoph Freytag, Ulf Leser, Describing Differences between Databases, ACM 15th Conference on Information and Knowledge Management (CIKM), Arlington, VA, USA, 2006 |
| Peter Buneman, Heiko Müller, Chris Rusbridge, Curating the CIA World Factbook, The International Journal of Digital Curation, Issue 3, Volume 4, 2009 |
| Kristian Rother, Silke Trißl , Heiko Müller, Thomas Steinke, Ina Koch, Robert Preissner, Cornelius Frömmel, Ulf Leser, Columba: An Integrated Database of Proteins, Structures, and Annotations, BMC Bioinformatics, March 2005 |
| Heiko Müller, Peter Buneman, Ioannis Koltsidas, XArch: archiving scientific and reference data, ACM SIGMOD international conference on Management of data, Vancouver, Canada, 2008, 1295-1298 |
| Peter Buneman, James Cheney, Sam Lindley, Heiko Müller, DBWiki: A Structured Wiki for Curated Data and Collaborative Data Management, ACM SIGMOD international conference on Management of data, Athens, Greece, 2011 |
| Heiko Müller, Felix Naumann, Johann-Christoph Freytag, Data Quality in Genome Databases, Proceedings of the Conference on Information Quality (IQ 03), Boston |
| Heiko Müller, Ulf Leser, Johann-Christoph Freytag, Mining for Patterns in Contradictory Data, Proceedings of the SIGMOD International Workshop on Information Quality for Information Systems (IQIS'04), Paris, France, 2004 |