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Publications of year 2012

Articles in journal, book chapters

  1. O. Acosta, J. Fripp, V. Dore, P. Bourgeat, J-M. Favreau, G. Chételat, A. Rueda, V.L. Villemagne, C. Szoeke, D. Ames, K.A. Ellis, R.N. Martins, C.L. Masters, C.C. Rowe, E. Bonner, F. Gris, D. Xiao, P. Raniga, V. Barra, and O. Salvado. Cortical surface mapping using topology correction, partial flattening and 3D shape context-based non-rigid registration for use in quantifying atrophy in Alzheimer's disease. Journal of Neuroscience Methods, 205(1):96-109, March 2012.
    @Article{Acosta:Neuroscience:11,
    author = {Acosta, O. and Fripp, J. and Dore, V. and Bourgeat, P. and Favreau, J-M. and Ch{\'e}telat, G. and Rueda, A. and Villemagne, V.L. and Szoeke, C. and Ames, D. and Ellis, K.A. and Martins, R.N. and Masters, C.L. and Rowe, C.C. and Bonner, E. and Gris, F. and Xiao, D. and Raniga, P. and Barra, V. and Salvado, O.},
    title = {Cortical surface mapping using topology correction, partial flattening and 3D shape context-based non-rigid registration for use in quantifying atrophy in Alzheimer's disease},
    journal = {Journal of Neuroscience Methods},
    year = {2012},
    publisher = {Elsevier},
    month = {March},
    volume = {205},
    number = {1},
    pages = {96-109},
    url = {http://dx.doi.org/10.1016/j.jneumeth.2011.12.011} 
    
    
    }
    

  2. Shekhar Chandra. Exact image representation via a Number-Theoretic Radon Transform. IET Computer Vision, 2012. Note: Accepted May.
    @ARTICLE{Chandra2012a,
    author = {Shekhar Chandra},
    title = {Exact image representation via a {N}umber-{T}heoretic {R}adon {T}ransform},
    journal = {IET Computer Vision},
    year = {2012},
    note = {Accepted May},
    
    }
    

  3. Shekhar Chandra, Jason Dowling, Kaikai Shen, Parnesh Raniga, Josien F Pluim, Peter B Greer, Olivier Salvado, and Jurgen Fripp. Patient specific prostate segmentation in 3-D magnetic resonance images. IEEE Transactions on Medical Imaging, 31(10):1955-64, 2012.
    @ARTICLE{Chandra2012,
    author = {Shekhar Chandra and Jason Dowling and Kaikai Shen and Parnesh Raniga and Josien F Pluim and Peter B Greer and Olivier Salvado and Jurgen Fripp},
    title = {{Patient specific prostate segmentation in 3-D magnetic resonance images}},
    journal = {IEEE Transactions on Medical Imaging},
    year = {2012},
    volume = {31(10)},
    pages = {1955-64} 
    }
    

  4. Shekhar Chandra, Imants Svalbe, Nicolas Normand, Andrew Kingston, and Jean-Pierre Guédon. Recovering missing Coefficients from Discrete Fourier space using Ghosts. IEEE Trans. Image Processing, 2012. Note: Accepted March, arXiv:1101.0076v1 [math-ph].
    @ARTICLE{Chandra2012,
    author = {Shekhar Chandra and Imants Svalbe and Nicolas Normand and Andrew Kingston and Jean-Pierre Gu\'edon},
    title = {Recovering missing {C}oefficients from {D}iscrete {F}ourier space using {G}hosts},
    journal = {IEEE Trans. Image Processing},
    year = {2012},
    note = {Accepted March, arXiv:1101.0076v1 [math-ph]},
    
    }
    

  5. Amine Chellali, Cedric Dumas, and Isabelle Milleville. Haptic communication to support biopsy procedures learning in virtual environments. Presence, 21(4):470-489, september 2012.
    @Article{dumas:mit:2012,
    author = {Chellali, Amine and Dumas, Cedric and Milleville, Isabelle},
    title = {Haptic communication to support biopsy procedures learning in virtual environments},
    journal = {Presence},
    publisher = {MIT Press},
    volume = {21},
    number = {4},
    year = {2012},
    month = {september},
    pages = {470-489},
    url = {http://www.mitpressjournals.org/doi/abs/10.1162/PRES_a_00128} 
    }
    

  6. M. Cheng, W. Marinovic, M. Watson, S. Ourselin, J. Passenger, H. de Visser, O. Salvado, and S. Riek. Abdominal Palpation Haptic Device for Colonoscopy Simulation Using Pneumatic Control.. IEEE Transactions on Haptics, 5(2):97-108, 2012. Note: DOI: 10.1109/TOH.2011.66.
    @Article{Cheng:ToH:12,
    author = {Cheng, M. and Marinovic, W. and Watson, M. and Ourselin, S. and Passenger, J. and de Visser, H. and Salvado, O. and Riek, S.},
    title = {Abdominal Palpation Haptic Device for Colonoscopy Simulation Using Pneumatic Control.},
    journal = {IEEE Transactions on Haptics},
    volume = {5},
    number = {2},
    year = {2012},
    pages = {97-108},
    note = {DOI: 10.1109/TOH.2011.66} 
    }
    

  7. Elizabeth Cyarto, Nicola Lautenschlager, P M Desmond, David Ames, Cassandra Szoeke, Olivier Salvado, Matthew Sharman, Kathryn Ellis, Pramit Phal, Colin Masters, Christopher Rowe, Ralph Martins, and Kay Cox. Protocol for a randomized controlled trial evaluating the effect of physical activity on delaying the progression of white matter changes on MRI in older adults with memory complaints and mild cognitive impairment: The AIBL Active trial. BMC Psychiatry, :§, 2012.
    @article{uid23,
    title = {Protocol for a randomized controlled trial evaluating the effect of physical activity on delaying the progression of white matter changes on MRI in older adults with memory complaints and mild cognitive impairment: The AIBL Active trial},
    volume = {},
    journal = {BMC Psychiatry},
    author = {Cyarto, Elizabeth and Lautenschlager, Nicola and Desmond, P M and Ames, David and Szoeke, Cassandra and Salvado, Olivier and Sharman, Matthew and Ellis, Kathryn and Phal, Pramit and Masters, Colin and Rowe, Christopher and Martins, Ralph and Cox, Kay},
    year = {2012},
    publisher = {BMC},
    pages = {§} 
    }
    

  8. J. Dowling, J. Lambert, J. Parker, O. Salvado, J. Fripp, C. Wratten, A. Capp, J.W. Denham, and P. Greer. An atlas-based electron-density mapping method for MRI-alone treatment planning and adaptive MRI-based prostate radiation therapy. International Journal of Radiation Oncology, Biology, Physics, 83(1):e5-e11, 2012.
    @Article{Dowling:RedJ:11,
    author = {Dowling, J. and Lambert, J. and Parker, J. and Salvado, O. and Fripp, J. and Wratten, C. and Capp, A. and Denham, J.W. and Greer, P.},
    title = {An atlas-based electron-density mapping method for MRI-alone treatment planning and adaptive MRI-based prostate radiation therapy },
    journal = {International Journal of Radiation Oncology, Biology, Physics},
    year = {2012},
    volume = {83},
    number = {1},
    pages = {e5-e11} 
    }
    

  9. Soumya Ghose, Arnau Oliver, Robert Martì, Xavier Lladó, Jordi Freixenet, Jhimli Mitra, Joan Carles Vilanova, Josep Comet, and Fabrice Meriaudeau. Statistical Shape and Texture Model of Quadrature Phase Information for Prostate Segmentation. International Journal of Computer Assisted Radiology and Surgery, 7:43-55, 2012.
    @Article{Ghose:2012,
    author = {Soumya Ghose and Arnau Oliver and Robert Mart{\'i} and Xavier~Llad{\'o} and Jordi Freixenet and Jhimli Mitra and Joan Carles Vilanova and Josep Comet and Fabrice Meriaudeau},
    title = {Statistical Shape and Texture Model of Quadrature Phase Information for Prostate Segmentation},
    journal = {International Journal of Computer Assisted Radiology and Surgery},
    publisher = {Springer},
    volume = {7},
    pages = {43-55},
    year = {2012} 
    }
    

  10. Soumya Ghose, Arnau Oliver, Robert Martì, Xavier Lladó, Joan C. Vilanova, Jordi Freixenet, Jhimli Mitra, Désiré Sidibé, and Fabrice Meriaudeau. A survey of prostate segmentation methodologies in ultrasound, magnetic resonance and computed tomography images. Computer Methods and Programs in Biomedicine, 108:262-287, 2012.
    @article{Ghose:2012ps,
    title = {A survey of prostate segmentation methodologies in ultrasound, magnetic resonance and computed tomography images},
    journal = {Computer Methods and Programs in Biomedicine},
    publisher = {Elsevier},
    year = {2012},
    volume = {108},
    pages = {262-287},
    author = {Soumya Ghose and Arnau Oliver and Robert Mart{\'i} and Xavier~Llad{\'o} and Joan C. Vilanova and Jordi Freixenet and Jhimli Mitra and D\'esir\'e Sidib\'e and Fabrice Meriaudeau} 
    }
    

  11. J.J. Maller, R.H.S. Thomson, K. Pannek, S.E. Rose, N. Bailey, P.M. Lewis, and P.B. Fitzgerald. The (Eigen) value of diffusion tensor imaging to investigate depression after traumatic brain injury. Human Brain Mapping, 2012.
    @article{maller2012eigen,
    title={The (Eigen) value of diffusion tensor imaging to investigate depression after traumatic brain injury},
    author={Maller, J.J. and Thomson, R.H.S. and Pannek, K. and Rose, S.E. and Bailey, N. and Lewis, P.M. and Fitzgerald, P.B.},
    journal={Human Brain Mapping},
    year={2012},
    publisher={Wiley Subscription Services, Inc., A Wiley Company} 
    }
    

  12. Jhimli Mitra, Zoltan Kato, Robert Martì, Arnau Oliver, Xavier Lladó, Désiré Sidibé, Soumya Ghose, Joan C. Vilanova, Josep Comet, and Fabrice Meriaudeau. A spline-based non-linear diffeomorphism for multimodal prostate registration. Medical Image Analysis, 16(6):1259-1279, 2012.
    @ARTICLE{MitraMIA2012,
    author = "Jhimli Mitra and Zoltan Kato and Robert Mart{\'i} and Arnau Oliver and Xavier Llad{\'o} and D{\'e}sir{\'e} Sidib{\'e} and Soumya Ghose and Joan C. Vilanova and Josep Comet and Fabrice Meriaudeau",
    title = "A spline-based non-linear diffeomorphism for multimodal prostate registration",
    journal = "Medical Image Analysis",
    volume = "16",
    number = "6",
    pages = "1259--1279",
    year = "2012" 
    }
    

  13. Jhimli Mitra, Robert Martì, Arnau Oliver, Xavier Lladó, Soumya Ghose, Joan C. Vilanova, and Fabrice Meriaudeau. Prostate multimodality image registration based on B-splines and quadrature local energy. International Journal of Computer Assisted Radiology and Surgery, 7(3):445-454, 2012.
    @ARTICLE{MitraJCARS2012,
    author = "Jhimli Mitra and Robert Mart{\'i} and Arnau Oliver and Xavier Llad{\'o} and Soumya Ghose and Joan C. Vilanova and Fabrice Meriaudeau",
    title = "Prostate multimodality image registration based on B-splines and quadrature local energy",
    journal = "International Journal of Computer Assisted Radiology and Surgery",
    volume = "7",
    number = "3",
    pages = "445--454",
    year = "2012" 
    }
    

  14. Ales Neubert, Jurgen Fripp, Craig Engstrom, Raphael Schwarz, Lars Lauer, Olivier Salvado, and Stuart Crozier. Automated Detection, 3D Segmentation and Analysis of High Resolution Spine MR Images Using Statistical Shape Models. Physics in Medicine and Biology, 9:8357-8376, 2012.
    @article{uid18,
    title = {Automated Detection, 3D Segmentation and Analysis of High Resolution Spine MR Images Using Statistical Shape Models},
    volume = {9},
    journal = {Physics in Medicine and Biology},
    author = {Neubert, Ales and Fripp, Jurgen and Engstrom, Craig and Schwarz, Raphael and Lauer, Lars and Salvado, Olivier and Crozier, Stuart},
    year = {2012},
    publisher = {IOP Science},
    pages = {8357-8376} 
    }
    

  15. A. Neubert, O. Salvado, O. Acosta, P. Bourgeat, and J. Fripp. Constrained reverse diffusion for thick slice interpolation of 3D volumetric MRI images. Computerized Medical Imaging and Graphics, 36(2):130-138, 2012.
    @Article{Neubert:CMIG:11,
    author = {Neubert, A. and Salvado, O. and Acosta, O. and Bourgeat, P. and Fripp, J.},
    title = {Constrained reverse diffusion for thick slice interpolation of 3D volumetric MRI images},
    journal = {Computerized Medical Imaging and Graphics},
    year = {2012},
    volume = {36},
    number = {2},
    pages = {130--138} 
    }
    

  16. K. Pannek, A. Guzzetta, P.B. Colditz, and S.E. Rose. Diffusion MRI of the neonate brain: acquisition, processing and analysis techniques. Pediatric Radiology, pp 1-14, 2012.
    @article{pannek2012diffusion,
    title={Diffusion MRI of the neonate brain: acquisition, processing and analysis techniques},
    author={Pannek, K. and Guzzetta, A. and Colditz, P.B. and Rose, S.E.},
    journal={Pediatric Radiology},
    pages={1--14},
    year={2012},
    publisher={Springer Berlin/Heidelberg} 
    }
    

  17. K. Pannek, D. Raffelt, C. Bell, J.L. Mathias, and S.E. Rose. HOMOR: Higher Order Model Outlier Rejection for high b-value MR diffusion data. NeuroImage, 2012.
    @article{pannek2012homor,
    title={HOMOR: Higher Order Model Outlier Rejection for high b-value MR diffusion data},
    author={Pannek, K. and Raffelt, D. and Bell, C. and Mathias, J.L. and Rose, S.E.},
    journal={NeuroImage},
    year={2012},
    publisher={Academic Press} 
    }
    

  18. Anthony Paproki, Xavier Sirault, Scott Berry, Robert Furbank, and Jurgen Fripp. A novel mesh processing based technique for 3D plant analysis. BMC Plant Biology, 12(1):63, 2012.
    @Article{1471-2229-12-63,
    AUTHOR = {Paproki, Anthony and Sirault, Xavier and Berry, Scott and Furbank, Robert and Fripp, Jurgen},
    TITLE = {A novel mesh processing based technique for 3D plant analysis},
    JOURNAL = {BMC Plant Biology},
    VOLUME = {12},
    YEAR = {2012},
    NUMBER = {1},
    PAGES = {63},
    URL = {http://www.biomedcentral.com/1471-2229/12/63},
    DOI = {10.1186/1471-2229-12-63},
    
    }
    

  19. Nguyen Pham, F Bashirzadeh, I.B. Masters, Olivier Salvado, Nicholas Dowson, David Fielding, J Hundloe, R Ware, M Bhatt, and Ar Kumar. Optical differentiation of malignant and benign lymphadenopathy by grey scale texture analysis of endobroncial ultrasound covex probe images. Chest, :709-715, 2012.
    @article{uid4,
    title = {Optical differentiation of malignant and benign lymphadenopathy by grey scale texture analysis of endobroncial ultrasound covex probe images},
    volume = {},
    journal = {Chest},
    author = {Pham, Nguyen and Bashirzadeh, F and Masters, I.B. and Salvado, Olivier and Dowson, Nicholas and Fielding, David and Hundloe, J and Ware, R and Bhatt, M and Kumar, Ar},
    year = {2012},
    publisher = {ACCP (American College of Chest Physicians)},
    pages = {709-715} 
    }
    

  20. David Raffelt, J-Donald Tournier, Stuart Crozier, Alan Connelly, and Olivier Salvado. Reorientation of Fibre Orientation Distributions using Apodised Point Spread Functions. Magnetic Resonance in Medicine, C:844-855, 2012.
    @article{uid2,
    title = {Reorientation of Fibre Orientation Distributions using Apodised Point Spread Functions},
    volume = {C},
    journal = {Magnetic Resonance in Medicine},
    author = {Raffelt, David and Tournier, J-Donald and Crozier, Stuart and Connelly, Alan and Salvado, Olivier},
    year = {2012},
    publisher = {Wiley},
    pages = {844-855} 
    }
    

  21. David Raffelt, J.-Donald Tournier, Stephen Rose, Gerard R. Ridgway, Robert Henderson, Stuart Crozier, Olivier Salvado, and Alan Connelly. Apparent Fibre Density: A novel measure for the analysis of diffusion-weighted magnetic resonance images. NeuroImage, 59(4):3976-3994, February 2012.
    Abstract:
    This article proposes a new measure called Apparent Fibre Density {(AFD)} for the analysis of high angular resolution diffusion-weighted images using higher-order information provided by fibre orientation distributions {(FODs)} computed using spherical deconvolution. {AFD} has the potential to provide specific information regarding differences between populations by identifying not only the location, but also the orientations along which differences exist. In this work, analytical and numerical Monte-Carlo simulations are used to support the use of the {FOD} amplitude as a quantitative measure (i.e. {AFD)} for population and longitudinal analysis. To perform robust voxel-based analysis of {AFD}, we present and evaluate a novel method to modulate the {FOD} to account for changes in fibre bundle cross-sectional area that occur during spatial normalisation. We then describe a novel approach for statistical analysis of {AFD} that uses cluster-based inference of differences extended throughout space and orientation. Finally, we demonstrate the capability of the proposed method by performing voxel-based {AFD} comparisons between a group of Motor Neurone Disease patients and healthy control subjects. A significant decrease in {AFD} was detected along voxels and orientations corresponding to both the corticospinal tract and corpus callosal fibres that connect the primary motor cortices. In addition to corroborating previous findings in {MND}, this study demonstrates the clear advantage of using this type of analysis by identifying differences along single fibre bundles in regions containing multiple fibre populations.

    @article{raffelt_apparent_2012,
    title = {Apparent Fibre Density: A novel measure for the analysis of diffusion-weighted magnetic resonance images},
    volume = {59},
    url = {http://www.sciencedirect.com/science/article/pii/S1053811911012092},
    doi = {10.1016/j.neuroimage.2011.10.045},
    abstract = {This article proposes a new measure called Apparent Fibre Density {(AFD)} for the analysis of high angular resolution diffusion-weighted images using higher-order information provided by fibre orientation distributions {(FODs)} computed using spherical deconvolution. {AFD} has the potential to provide specific information regarding differences between populations by identifying not only the location, but also the orientations along which differences exist. In this work, analytical and numerical Monte-Carlo simulations are used to support the use of the {FOD} amplitude as a quantitative measure (i.e. {AFD)} for population and longitudinal analysis. To perform robust voxel-based analysis of {AFD}, we present and evaluate a novel method to modulate the {FOD} to account for changes in fibre bundle cross-sectional area that occur during spatial normalisation. We then describe a novel approach for statistical analysis of {AFD} that uses cluster-based inference of differences extended throughout space and orientation. Finally, we demonstrate the capability of the proposed method by performing voxel-based {AFD} comparisons between a group of Motor Neurone Disease patients and healthy control subjects. 
    
    A significant decrease in {AFD} was detected along voxels and orientations corresponding to both the corticospinal tract and corpus callosal fibres that connect the primary motor cortices. In addition to corroborating previous findings in {MND}, this study demonstrates the clear advantage of using this type of analysis by identifying differences along single fibre bundles in regions containing multiple fibre populations.},
    number = {4},
    journal = {{NeuroImage}},
    author = {Raffelt, David and Tournier, J.-Donald and Rose, Stephen and Ridgway, Gerard R. and Henderson, Robert and Crozier, Stuart and Salvado, Olivier and Connelly, Alan},
    month = "February",
    year = {2012},
    ,
    pages = {3976--3994},
    
    }
    

  22. David Rivest-Hénault, Hari Sundar, and Mohamed Cheriet. Non-Rigid 2D/3D Registration of Coronary Artery Models with Live Fluoroscopy for Guidance of Cardiac Interventions. IEEE-TMI, 31(8):1557-1572, August 2012.
    @ARTICLE{Rivest2012,
    author = {David Rivest-H\'{e}nault and Hari Sundar and Mohamed Cheriet},
    title = {Non-Rigid 2D/3D Registration of Coronary Artery Models with Live Fluoroscopy for Guidance of Cardiac Interventions},
    journal = {IEEE-TMI},
    year = {2012},
    volume = {31},
    pages = {1557--1572},
    number = {8},
    month = {Aug},
    
    }
    

  23. S.E. Rose, M. Fay, P. Thomas, P. Bourgeat, N. Dowson, O. Salvado, Y. Gal, A. Coulthard, and S. Crozier. Correlation of MRI-Derived Apparent Diffusion Coefficients in Newly Diagnosed Gliomas with [18F]-Fluoro-L-Dopa PET: What Are We Really Measuring with Minimum ADC?. American journal of neuroradiology, October 2012.
    @article{Rose:2012,
    title = {Correlation of {MRI-Derived} Apparent Diffusion Coefficients in Newly Diagnosed Gliomas with {[18F]-Fluoro-L-Dopa} {PET:} What Are We Really Measuring with Minimum {ADC?}},
    url = {http://dx.doi.org/10.3174/ajnr.A3315},
    journal = {American journal of neuroradiology},
    publisher = {American Society of Neuroradiology},
    author = {Rose, S.E. and Fay, M. and Thomas, P. and Bourgeat, P. and Dowson, N. and Salvado, O. and Gal, Y. and Coulthard, A. and Crozier, S.},
    month = {October},
    year = {2012},
    
    }
    

  24. S.E. Rose, K. Pannek, C. Bell, F. Baumann, N. Hutchinson, A. Coulthard, P. McCombe, and R. Henderson. Direct evidence of intra-and interhemispheric corticomotor network degeneration in amyotrophic lateral sclerosis: An automated MRI structural connectivity study. Neuroimage, 59(3):2661-2669, 2012.
    @article{rose2012direct,
    title={Direct evidence of intra-and interhemispheric corticomotor network degeneration in amyotrophic lateral sclerosis: An automated MRI structural connectivity study},
    author={Rose, S.E. and Pannek, K. and Bell, C. and Baumann, F. and Hutchinson, N. and Coulthard, A. and McCombe, P. and Henderson, R.},
    journal={Neuroimage},
    volume={59},
    number={3},
    pages={2661--2669},
    year={2012},
    publisher={Academic Press} 
    }
    

  25. S.E. Rose, T. Rowland, K. Pannek, F. Baumann, A. Coulthard, P. McCombe, and R. Henderson. Structural hemispheric asymmetries in the human precentral gyrus hand representation. Neuroscience, 2012.
    @article{rose2012structural,
    title={Structural hemispheric asymmetries in the human precentral gyrus hand representation},
    author={Rose, S.E. and Rowland, T. and Pannek, K. and Baumann, F. and Coulthard, A. and McCombe, P. and Henderson, R.},
    journal={Neuroscience},
    year={2012},
    publisher={Pergamon} 
    }
    

  26. S.M. Scheck, R.N. Boyd, and S.E. Rose. New insights into the pathology of white matter tracts in cerebral palsy from diffusion magnetic resonance imaging: a systematic review. Developmental Medicine & Child Neurology, 2012.
    @article{scheck2012new,
    title={New insights into the pathology of white matter tracts in cerebral palsy from diffusion magnetic resonance imaging: a systematic review},
    author={Scheck, S.M. and Boyd, R.N. and Rose, S.E.},
    journal={Developmental Medicine \& Child Neurology},
    year={2012},
    publisher={Blackwell Publishing Ltd} 
    }
    

  27. Kaikai Shen, Jurgen Fripp, Fabrice Mériaudeau, Gaël Chételat, Olivier Salvado, and Pierrick Bourgeat. Detecting global and local hippocampal shape changes in Alzheimer's disease using statistical shape models. NeuroImage, 59(3):2155-2166, 2012.
    @article{shen_detectingNI_2012,
    title = {Detecting global and local hippocampal shape changes in Alzheimer's disease using statistical shape models},
    url = {http://www.sciencedirect.com/science/article/pii/S105381191101175X},
    year=2012,
    volume=59,
    number=3,
    pages={2155--2166},
    journal = {{NeuroImage}},
    author = {Shen, Kaikai and Fripp, Jurgen and M\'eriaudeau, Fabrice and Ch\'etelat, Ga\"el and Salvado, Olivier and Bourgeat, Pierrick},
    
    }
    

  28. Imants Svalbe, Nicolas Normand, and Shekhar Chandra. Stealth functions: shapes with projections and reconstructed images that have low visibility. Computer Vision and Image Understanding, Febuary 2012. Note: Submitted.
    @ARTICLE{Svalbe2012,
    author = {Imants Svalbe and Nicolas Normand and Shekhar Chandra},
    title = {Stealth functions: shapes with projections and reconstructed images that have low visibility},
    journal = {Computer Vision and Image Understanding},
    year = {2012},
    month = {Febuary},
    note = {Submitted},
    
    }
    

  29. Nicolas Villain, Gael Chetelat, Blandine Grassiot, Pierrick Bourgeat, Gareth Jones, Kathryn A. Ellis, David Ames, Ralph N. Martins, Francis Eustache, Olivier Salvado, Colin L. Masters, Christopher C. Rowe, and Victor L. Villemagne. Regional Dynamics of Amyloid-b Deposition in Healthy Elderly, Mild Cognitive Impairment and Alzheimer's Disease: A Voxelwise PiB-PET Longitudinal Study. Brain, May 2012.
    Abstract:
    Amyloid-b deposition in Alzheimer's disease is thought to start while individuals are still cognitively unimpaired and it is hypothesized that after an early phase of fast accumulation, a plateau is reached by the time of cognitive decline. However, few longitudinal Pittsburgh compound B-positron emission tomography studies have tested this hypothesis, and with conflicting results. The purpose of this work is to further our understanding of the dynamics of amyloid-? deposition in a large longitudinal cohort. A total of 32 patients with Alzheimer's disease, 49 subjects with mild cognitive impairment and 103 healthy controls underwent two Pittsburgh compound B-positron emission tomography scans 18 months apart. For each participant, a parametric map of Pittsburgh compound B-positron emission tomography rate of change was created [(follow-up scan ? baseline scan)/follow-up duration] and entered in a voxelwise three-way analysis of covariance, with clinical status (healthy controls, mild cognitive impairment or Alzheimer’s disease), disease progression (clinical conversion from healthy controls to mild cognitive impairment or Alzheimer’s disease, or from mild cognitive impairment to Alzheimer’s disease) and Pittsburgh compound B status (positive versus negative) as independent factors. Only a significant effect of the Pittsburgh compound B status was found: both Pittsburgh compound B-positive and -negative subjects showed a significant increase in amyloid-? deposition, with this increase being significantly higher in Pittsburgh compound B-positive individuals. This finding suggests either that Pittsburgh compound B-negative individuals have slower rates of amyloid-? accumulation than positive, or that the proportion of individuals showing significant increase in amyloid-? deposition, termed {‘Pittsburgh} compound B accumulators’, is higher within the Pittsburgh compound B-positive group than within the Pittsburgh compound B-negative group. The bimodal distribution of the individual rates of neocortical amyloid-? accumulation observed support the existence of {‘Pittsburgh} compound B non-accumulators’ and {‘Pittsburgh} compound B accumulators’ and different clustering analyses led to a consistent threshold to separate these two subgroups (0.014–0.022 standardized uptake value ratiopons/year). The voxelwise three-way analysis of covariance was thus recomputed with the {‘Pittsburgh} compound B accumulators’ only and the results were almost unchanged, with the Pittsburgh compound B-positive group showing higher accumulation than the Pittsburgh compound B-negative group. Finally, a significant negative correlation was found between Pittsburgh compound B rate of change and Pittsburgh compound B baseline burden, but only in the Pittsburgh compound B-positive group (r = ?0.24; P = 0.025). Higher rates of amyloid-? deposition are associated with higher amyloid-? burden suggesting that amyloid-? deposition does not reach a plateau when cognitive impairments manifest but is instead an ongoing process present even at the Alzheimer’s disease stage. amyloid-? accumulation also seems to slow down at the latest stages of the process, i.e. in participants with the highest amyloid burden. Furthermore, this study identified the existence of Pittsburgh compound ‘accumulators’ and ‘non-accumulators’, notably within the Pittsburgh compound B-negative group, which may be a relevant concept for future studies.

    @article{villain_regional_2012,
    title = {Regional Dynamics of Amyloid-b Deposition in Healthy Elderly, Mild Cognitive Impairment and Alzheimer's Disease: A Voxelwise PiB-PET Longitudinal Study},
    url = {http://brain.oxfordjournals.org/content/early/2012/05/23/brain.aws125},
    doi = {10.1093/brain/aws125},
    abstract = {Amyloid-b deposition in Alzheimer's disease is thought to start while individuals are still cognitively unimpaired and it is hypothesized that after an early phase of fast accumulation, a plateau is reached by the time of cognitive decline. However, few longitudinal Pittsburgh compound B-positron emission tomography studies have tested this hypothesis, and with conflicting results. The purpose of this work is to further our understanding of the dynamics of amyloid-? deposition in a large longitudinal cohort. A total of 32 patients with Alzheimer's disease, 49 subjects with mild cognitive impairment and 103 healthy controls underwent two Pittsburgh compound B-positron emission tomography scans 18 months apart. For each participant, a parametric map of Pittsburgh compound B-positron emission tomography rate of change was created [(follow-up scan ? baseline scan)/follow-up duration] and entered in a voxelwise three-way analysis of covariance, with clinical status (healthy controls, mild cognitive impairment or Alzheimer’s disease), disease progression (clinical conversion from healthy controls to mild cognitive impairment or Alzheimer’s disease, or from mild cognitive impairment to Alzheimer’s disease) and Pittsburgh compound B status (positive versus negative) as independent factors. Only a significant effect of the Pittsburgh compound B status was found: both Pittsburgh compound B-positive and -negative subjects showed a significant increase in amyloid-? deposition, with this increase being significantly higher in Pittsburgh compound B-positive individuals. This finding suggests either that Pittsburgh compound B-negative individuals have slower rates of amyloid-? accumulation than positive, or that the proportion of individuals showing significant increase in amyloid-? deposition, termed {‘Pittsburgh} compound B accumulators’, is higher within the Pittsburgh compound B-positive group than within the Pittsburgh compound B-negative group. The bimodal distribution of the individual rates of neocortical amyloid-? accumulation observed support the existence of {‘Pittsburgh} compound B non-accumulators’ and {‘Pittsburgh} compound B accumulators’ and different clustering analyses led to a consistent threshold to separate these two subgroups (0.014–0.022 standardized uptake value ratiopons/year). The voxelwise three-way analysis of covariance was thus recomputed with the {‘Pittsburgh} compound B accumulators’ only and the results were almost unchanged, with the Pittsburgh compound B-positive group showing higher accumulation than the Pittsburgh compound B-negative group. Finally, a significant negative correlation was found between Pittsburgh compound B rate of change and Pittsburgh compound B baseline burden, but only in the Pittsburgh compound B-positive group (r = ?0.24; P = 0.025). Higher rates of amyloid-? deposition are associated with higher amyloid-? burden suggesting that amyloid-? deposition does not reach a plateau when cognitive impairments manifest but is instead an ongoing process present even at the Alzheimer’s disease stage. amyloid-? accumulation also seems to slow down at the latest stages of the process, i.e. in participants with the highest amyloid burden. Furthermore, this study identified the existence of Pittsburgh compound ‘accumulators’ and ‘non-accumulators’, notably within the Pittsburgh compound B-negative group, which may be a relevant concept for future studies.},
    journal = {Brain},
    author = {Villain, Nicolas and Chetelat, Gael and Grassiot, Blandine and Bourgeat, Pierrick and Jones, Gareth and Ellis, Kathryn A. and Ames, David and Martins, Ralph N. and Eustache, Francis and Salvado, Olivier and Masters, Colin L. and Rowe, Christopher C. and Villemagne, Victor L.},
    month = "May",
    year = {2012},
    ,
    
    }
    

Conference articles

  1. P. Bourgeat, V. Dore, K. Shen, P. Raniga, O. Salvado, J. Fripp, and the Alzheimer’s Disease Neuroimaging Initiative. Atrophy challenge: Enforcing Longitudinal Consistency in Longitudinal analysis using multi-atlas segmentation. In MICCAI 2012 Workshop on Novel Imaging Biomarkers for Alzheimer's Disease and Related Disorders (NIBAD'12), Nice, France, October 5 2012.
    @INPROCEEDINGS{Bourgeat2:nibad1:12,
    
    
    author = {Bourgeat, P. and Dore, V. and Shen, K. and Raniga, P. and Salvado, O. and Fripp, J. and {the Alzheimer’s Disease Neuroimaging Initiative}},
    title = {Atrophy challenge: Enforcing Longitudinal Consistency in Longitudinal analysis using multi-atlas segmentation},
    BOOKTITLE = {MICCAI 2012 Workshop on Novel Imaging Biomarkers for Alzheimer's Disease and Related Disorders (NIBAD'12)},
    YEAR = {2012},
    ADDRESS = {Nice, France},
    MONTH = {October 5},
    
    }
    

  2. P. Bourgeat, J. Fripp, P. Raniga, V. Dore, L. Zhou, R. Martins, S.L. Macaulay, C. Masters, D. Ames, K.A. Ellis, V. Villemagne, C. Rowe, O. Salvado, and Aibl research group. Longitudinal modeling of joint PiB/MRI changes in Alzheimer’s disease. In Alzheimer's Association International Conference in Alzheimer's Disease 2012, Vancouver, Canada, July 14-19 2012. Alzheimer's Association.
    @INPROCEEDINGS{Bourgeat1:icad:12,
    author = {Bourgeat, P. and Fripp, J. and Raniga, P., and Dore, V. and Zhou, L. and Martins, R. and Macaulay, S.L. and Masters, C. and Ames, D. and Ellis, K.A. and Villemagne, V. and Rowe, C. and Salvado, O. and {Aibl} research group},
    title = {Longitudinal modeling of joint PiB/MRI changes in Alzheimer’s disease},
    BOOKTITLE = {Alzheimer's Association International Conference in Alzheimer's Disease 2012},
    YEAR = {2012},
    ADDRESS = {Vancouver, Canada},
    MONTH = {July 14-19},
    PUBLISHER = {Alzheimer's Association},
    
    }
    

  3. Pierrick Bourgeat, Parnesh Raniga, Vincent Dore, Luping Zhou, Lance Macaulay, Ralph Martins, Colin Masters, David Ames, Kathryn Ellis, Victor Villemagne, Chris Rowe, Olivier Salvado, and Jurgen Fripp. Manifold driven MR-less PiB SUVR normalisation. In MICCAI 2012 Workshop on Novel Imaging Biomarkers for Alzheimer's Disease and Related Disorders, Nice, France, pages 01-Dec-13, 2012. MICCAI.
    @inproceedings{uid47,
    address = {Nice, France},
    title = {Manifold driven MR-less PiB SUVR normalisation},
    booktitle = {MICCAI 2012 Workshop on Novel Imaging Biomarkers for Alzheimer's Disease and Related Disorders},
    publisher = {MICCAI},
    author = {Bourgeat, Pierrick and Raniga, Parnesh and Dore, Vincent and Zhou, Luping and Macaulay, Lance and Martins, Ralph and Masters, Colin and Ames, David and Ellis, Kathryn and Villemagne, Victor and Rowe, Chris and Salvado, Olivier and Fripp, Jurgen},
    year = {2012},
    pages = {01-Dec-13} 
    }
    

  4. P. Bourgeat, O. Salvado, P. Raniga, V. Dore, L. Zhou, R. Martins, S.L. Macaulay, C. Masters, D. Ames, K. A. Ellis, V. Villemagne, C. Rowe, J. Fripp, and Aibl research group. Classification of Alzheimer’s subject based on PiB-MR Manifold learning. In Alzheimer's Association International Conference in Alzheimer's Disease 2012, Vancouver, Canada, July 14-19 2012. Alzheimer's Association.
    @INPROCEEDINGS{Bourgeat2:icad:12,
    author = {Bourgeat, P. and Salvado, O. and Raniga, P. and Dore, V. and Zhou, L. and Martins, R. and Macaulay, S.L. and Masters, C. and Ames, D. and Ellis, K. A. and Villemagne, V. and Rowe, C. and Fripp, J. and {Aibl} research group},
    title = {Classification of Alzheimer’s subject based on PiB-MR Manifold learning},
    BOOKTITLE = {Alzheimer's Association International Conference in Alzheimer's Disease 2012},
    YEAR = {2012},
    ADDRESS = {Vancouver, Canada},
    MONTH = {July 14-19},
    PUBLISHER = {Alzheimer's Association},
    
    }
    

  5. Belinda Brown, Jeremiah Peiffer, Veer Bala Gupta, Kevin Taddei, Olivier Salvado, Victor Villemagne, Stephanie Rainey-Smith, Kathryn Ellis, David Ames, Christopher Rowe, Colin Masters, Cassandra Szoeke, and Ralph Martins. Level of physical activity is associated with hippocampal volume in a subgroup of the AIBL cohort. In , volume 8, pages P494, July 2012.
    @inproceedings{brown_level_2012,
    title = {Level of physical activity is associated with hippocampal volume in a subgroup of the {AIBL} cohort},
    volume = {8},
    url = {http://linkinghub.elsevier.com/retrieve/pii/S1552526012014732?showall=true},
    number = {4},
    journal = {Alzheimer's \& dementia : the journal of the Alzheimer's Association},
    author = {Brown, Belinda and Peiffer, Jeremiah and Gupta, Veer Bala and Taddei, Kevin and Salvado, Olivier and Villemagne, Victor and Rainey-Smith, Stephanie and Ellis, Kathryn and Ames, David and Rowe, Christopher and Masters, Colin and Szoeke, Cassandra and Martins, Ralph},
    month = "July",
    year = {2012},
    pages = {P494} 
    }
    

  6. Samantha Burnham, Bill Wilson, Petra Graham, Harri Kiiveri, David Ames, Lance Macaulay, Ralph Martins, Colin Masters, Christopher Rowe, Olivier Salvado, Cassandra Szoeke, Victor Villemagne, Aibl Research Group, and Kathryn Ellis. Cognitive assessments as estimators of neocortical beta-amyloid burden in the AIBL cohort. In , volume 8, pages P130-P131, July 2012.
    @inproceedings{burnham_cognitive_2012,
    title = {Cognitive assessments as estimators of neocortical beta-amyloid burden in the {AIBL} cohort},
    volume = {8},
    url = {http://linkinghub.elsevier.com/retrieve/pii/S1552526012004785?showall=true},
    number = {4},
    journal = {Alzheimer's \& dementia : the journal of the Alzheimer's Association},
    author = {Burnham, Samantha and Wilson, Bill and Graham, Petra and Kiiveri, Harri and Ames, David and Macaulay, Lance and Martins, Ralph and Masters, Colin and Rowe, Christopher and Salvado, Olivier and Szoeke, Cassandra and Villemagne, Victor and {Aibl} Research Group and Ellis, Kathryn},
    month = "July",
    year = {2012},
    pages = {P130--P131} 
    }
    

  7. Shekhar Chandra, Ying Xia, Craig Engstrom, Raphael Schwarz, Lars Lauer, Stuart Crozier, Olivier Salvado, and Jurgen Fripp. Unilateral Hip Joint Segmentation with Shape Priors Learned from Missing Data. In IEEE International Symposium on Biomedical Imaging (ISBI), Proc. of, Barcelona, Spain, May 2012.
    @INPROCEEDINGS{Chandra2012b,
    author = {Shekhar Chandra and Ying Xia and Craig Engstrom and Raphael Schwarz and Lars Lauer and Stuart Crozier and Olivier Salvado and Jurgen Fripp},
    title = {Unilateral Hip Joint Segmentation with Shape Priors Learned from Missing Data},
    booktitle = {IEEE International Symposium on Biomedical Imaging (ISBI), Proc. of},
    year = {2012},
    address = {Barcelona, Spain},
    month = {May},
    
    }
    

  8. T.R. Coles, C. Dumas, D. Fielding, A. Hill, and M. Watson. Using low cost devices to provide metrics for motor skills training. In SimHealth 2012, pages 55-56, September 2012. Australian Society for Simulation in Healthcare.
    @conference{dum:sim:12,
    author = {Coles, T.R. and Dumas, C. and Fielding, D. and Hill, A. and Watson, M.},
    title = {Using low cost devices to provide metrics for motor skills training},
    booktitle = {SimHealth 2012},
    pages = {55-56},
    year = {2012},
    month = {September},
    publisher = {Australian Society for Simulation in Healthcare} 
    }
    

  9. Julien Couet, David Rivest-Hénault, Joaquim Miró, Chantale Lapierre, Luc Duong, and Mohamed Cheriet. Intensity-based 3D/2D registration for percutaneous intervention of major aorto-pulmonary collateral arteries. In Spie Medical Imaging, 2012.
    @INPROCEEDINGS{Couet2012,
    author = {Julien Couet and David Rivest-H\'enault and Joaquim Mir\'o and Chantale Lapierre and Luc Duong and Mohamed Cheriet},
    title = {Intensity-based 3D/2D registration for percutaneous 
    
    intervention of major aorto-pulmonary collateral arteries},
    booktitle = {Spie Medical Imaging},
    year = {2012},
    
    }
    

  10. Elizabeth Cyarto, Kay Cox, Patricia Desmond, David Ames, Cassandra Szoeke, Olivier Salvado, Matthew Sharman, Kathryn Ellis, Pramit Phal, Colin Masters, Christopher Rowe, Ralph Martins, and Nicola Lautenschlager. AIBL ACTIVE: A randomized controlled trial of physical activity to delay the progression of white matter hyperintensities on MRI in older adults at risk of cognitive decline. In , volume 8, pages P506, July 2012.
    @inproceedings{cyarto_aibl_2012,
    title = {{AIBL} {ACTIVE:} A randomized controlled trial of physical activity to delay the progression of white matter hyperintensities on {MRI} in older adults at risk of cognitive decline},
    volume = {8},
    url = {http://linkinghub.elsevier.com/retrieve/pii/S1552526012015099?showall=true},
    number = {4},
    journal = {Alzheimer's \& dementia : the journal of the Alzheimer's Association},
    author = {Cyarto, Elizabeth and Cox, Kay and Desmond, Patricia and Ames, David and Szoeke, Cassandra and Salvado, Olivier and Sharman, Matthew and Ellis, Kathryn and Phal, Pramit and Masters, Colin and Rowe, Christopher and Martins, Ralph and Lautenschlager, Nicola},
    month = "July",
    year = {2012},
    pages = {P506} 
    }
    

  11. Marion Dimigen, Shalini Vinod, Nira Borok, Jason Dowling, Lois Holloway, and Karen Lim. Application of Cervical Cancer MRI Contouring Guidelines in Clinical Practice. In Faculty of Radiation Oncology 2012 Annual Scientific Meeting, Cairns QLD, pages 226–256, 2012. Wiley-Blackwell.
    @inproceedings{uid28,
    address = {Cairns QLD},
    title = {Application of Cervical Cancer MRI Contouring Guidelines in Clinical Practice },
    booktitle = {Faculty of Radiation Oncology 2012 Annual Scientific Meeting},
    publisher = {Wiley-Blackwell},
    author = {Dimigen, Marion and Vinod, Shalini and Borok, Nira and Dowling, Jason and Holloway, Lois and Lim, Karen},
    year = {2012},
    pages = {226–256} 
    }
    

  12. M. Dimigen, S. Vinod, N. Borok, J. Dowling, L. Holloway, and K. Lim. Application of Cervical Cancer MRI Contouring Guidelines in Clinical Practice. In Proceedings of the RANZCR Faculty of Radiation Oncology Annual Scientific Meeting, Cairns, Queensland, Australia, pages Accepted, In Press, 2012.
    @INPROCEEDINGS{Whelan2012AAPM,
    author = {Dimigen, M. and Vinod, S. and Borok, N. and Dowling, J. and Holloway, L. and Lim, K. },
    title = {Application of Cervical Cancer MRI Contouring Guidelines in Clinical Practice },
    booktitle = {Proceedings of the RANZCR Faculty of Radiation Oncology Annual Scientific Meeting, Cairns, Queensland, Australia },
    year = {2012},
    pages = {Accepted, In Press} 
    }
    

  13. Marion Dimigen, Shalini Vinod, Nira Borok, Jason Dowling, Lois Holloway, and Karen Lim. The use of Cervical Cancer MRI Contouring Guidelines in Clinical Practice.. In American Society for Radiation Oncology - ASTRO, Boston, US, pages S433, 2012. Elsevier.
    @inproceedings{uid12,
    address = {Boston, US},
    title = {The use of Cervical Cancer MRI Contouring Guidelines in Clinical Practice.},
    booktitle = {American Society for Radiation Oncology - ASTRO},
    publisher = {Elsevier },
    author = {Dimigen, Marion and Vinod, Shalini and Borok, Nira and Dowling, Jason and Holloway, Lois and Lim, Karen},
    year = {2012},
    pages = {S433} 
    }
    

  14. Vincent Dore, Pierrick Bourgeat, Jurgen Fripp, Oscar Acosta, Gael Chetelat, Cassandra Szoeke, Kathryn Ellis, Ralph Martins, Victor Villemagne, Colin Masters, David Ames, Christopher Rowe, and Olivier Salvado. A Surface Based approach for cortical thickness comparison between PiB+ and PiB- Healthy Control subjects. In Proc. SPIE 8314, Medical Imaging 2012, San Diego, California United States, pages 831413-6, 2012. SPIE.
    @inproceedings{uid3,
    address = {San Diego, California United States},
    title = {A Surface Based approach for cortical thickness comparison between PiB+ and PiB- Healthy Control subjects},
    booktitle = {Proc. SPIE 8314, Medical Imaging 2012},
    publisher = {SPIE},
    author = {Dore, Vincent and Bourgeat, Pierrick and Fripp, Jurgen and Acosta, Oscar and Chetelat, Gael and Szoeke, Cassandra and Ellis, Kathryn and Martins, Ralph and Villemagne, Victor and Masters, Colin and Ames, David and Rowe, Christopher and Salvado, Olivier},
    year = {2012},
    pages = {831413-6} 
    }
    

  15. Vincent Dore, Jurgen Fripp, Pierrick Bourgeat, Oscar Acosta, Luping Zhou, Parnesh Raniga, Ralph Martins, Lance Macaulay, Kathryn Ellis, Colin Masters, David Ames, Victor Villemagne, Christopher Rowe, and Olivier Salvado. Longitudinal analysis of cortical thickness in PiB+ and PiB- healthy elderly controls. In , volume 8, pages P34, July 2012.
    @inproceedings{dore_longitudinal_2012,
    title = {Longitudinal analysis of cortical thickness in {PiB+} and {PiB-} healthy elderly controls},
    volume = {8},
    url = {http://linkinghub.elsevier.com/retrieve/pii/S1552526012002208?showall=true},
    number = {4},
    journal = {Alzheimer's \& dementia : the journal of the Alzheimer's Association},
    author = {Dore, Vincent and Fripp, Jurgen and Bourgeat, Pierrick and Acosta, Oscar and Zhou, Luping and Raniga, Parnesh and Martins, Ralph and Macaulay, Lance and Ellis, Kathryn and Masters, Colin and Ames, David and Villemagne, Victor and Rowe, Christopher and Salvado, Olivier},
    month = "July",
    year = {2012},
    pages = {P34} 
    }
    

  16. J. Dowling, J. Lambert, S. Chandra, J. Parker, J. Sun, P. Stanwell, J. Fripp, O. Salvado, and P. Greer. MRI based radiation therapy treatment planning. In Proceedings of The Australian-Canadian Prostate Cancer Research Alliance Symposium, DayDream Island, Queensland, Australia, pages 16-17, 2012.
    @INPROCEEDINGS{Dowling2012AUSCAN,
    author = {Dowling, J. and Lambert, J. and Chandra, S. and Parker, J. and Sun, J. and Stanwell, P. and Fripp, J. and Salvado, O. and Greer, P. },
    title = {MRI based radiation therapy treatment planning},
    booktitle = {Proceedings of The Australian-Canadian Prostate Cancer Research Alliance Symposium, DayDream Island, Queensland, Australia },
    year = {2012},
    pages = {16-17} 
    }
    

  17. Jason Dowling, Jonathon Lambert, Shakes Chandra, Joel Parker, Jidi Sun, Peter Stanwell, Jurgen Fripp, Olivier Salvado, and Peter Greer. MRI-based radiation therapy treatment planning. In Australian-Canadian Prostate Cancer Research Alliance Symposium, Daydream Island, QLD, Australia, pages pp. 16-17, 2012. Conference book only (I assume).
    @inproceedings{uid13,
    address = {Daydream Island, QLD, Australia},
    title = {MRI-based radiation therapy treatment planning},
    booktitle = {Australian-Canadian Prostate Cancer Research Alliance Symposium},
    publisher = {Conference book only (I assume)},
    author = {Dowling, Jason and Lambert, Jonathon and Chandra, Shakes and Parker, Joel and Sun, Jidi and Stanwell, Peter and Fripp, Jurgen and Salvado, Olivier and Greer, Peter},
    year = {2012},
    pages = {pp. 16-17} 
    }
    

  18. Noel Faux, Samantha Burnham, Bill Wilson, Gareth Jones, Simon Laws, Justin Bedo, David Ames, Ashley Bush, James Doecke, Kathryn Ellis, Richard Head, Harri Kiiveri, Lance Macaulay, Ralph Martins, Colin Masters, Christopher Rowe, Olivier Salvado, Cassandra Szoeke, and Victor Villemagne. An update on an AIBL blood-based biomarker panel for the prediction of A? burden. In , volume 8, pages P283, July 2012.
    @inproceedings{faux_update_2012,
    title = {An update on an {AIBL} blood-based biomarker panel for the prediction of A? burden},
    volume = {8},
    url = {http://linkinghub.elsevier.com/retrieve/pii/S1552526012008965?showall=true},
    number = {4},
    journal = {Alzheimer's \& dementia : the journal of the Alzheimer's Association},
    author = {Faux, Noel and Burnham, Samantha and Wilson, Bill and Jones, Gareth and Laws, Simon and Bedo, Justin and Ames, David and Bush, Ashley and Doecke, James and Ellis, Kathryn and Head, Richard and Kiiveri, Harri and Macaulay, Lance and Martins, Ralph and Masters, Colin and Rowe, Christopher and Salvado, Olivier and Szoeke, Cassandra and Villemagne, Victor},
    month = "July",
    year = {2012},
    pages = {P283} 
    }
    

  19. Jean-Baptiste Fiot, Laurent Risser, Laurent Cohen, Jurgen Fripp, and Francois-Xavier Vialard. Local vs global descriptors of hippocampus shape evolution for Alzheimer’s longitudinal population analysis. In MICCAI workshop, Nice, France, pages 13-24, 2012. Springer Berlin Heidelberg.
    @inproceedings{uid17,
    address = {Nice, France},
    title = {Local vs global descriptors of hippocampus shape evolution for Alzheimer’s longitudinal population analysis },
    booktitle = {MICCAI workshop},
    publisher = {Springer Berlin Heidelberg},
    author = {Fiot, Jean-Baptiste and Risser, Laurent and Cohen, Laurent and Fripp, Jurgen and Vialard, Francois-Xavier},
    year = {2012},
    pages = {13-24} 
    }
    

  20. Jurgen Fripp, Rachel Surowiec, Erin Lucas, Craig Engstrom, Shakes Chandra, Raphael Schwarz, Charles Ho, and Stuart Crozier. Automated cartilage morphometric and T2 mapping using 3D-FSE MRI at 3T. In International Society for Magnetic Resonance in Medicine, Utah, pages , 2012. Wiley.
    @inproceedings{uid35,
    address = {Utah},
    title = {Automated cartilage morphometric and T2 mapping using 3D-FSE MRI at 3T},
    booktitle = {International Society for Magnetic Resonance in Medicine },
    publisher = {Wiley},
    author = {Fripp, Jurgen and Surowiec, Rachel and Lucas, Erin and Engstrom, Craig and Chandra, Shakes and Schwarz, Raphael and Ho, Charles and Crozier, Stuart},
    year = {2012},
    pages = {} 
    }
    

  21. Y. Gal, S.E. Rose, P. Bourgeat, Z. Taylor, M. Fay, P. Thomas, N. Dowson, O. Salvado, and S. Crozier. Automatic assessment of high grade brain tumour tissue in MR images: What is tumour and what radiation injury. In 20th Annual International Society for Magnetic Resonance in Medicine (ISMRM) Scientific Meeting and Exhibition, Melbourne, Australia, May 5-11 2012.
    @INPROCEEDINGS{Gal:ismrm2:12,
    author = {Gal, Y. and Rose, S.E. and Bourgeat, P. and Taylor, Z. and Fay, M. and Thomas, P. and Dowson, N. and Salvado, O. and Crozier, S. },
    title = {Automatic assessment of high grade brain tumour tissue in MR images: What is tumour and what radiation injury},
    BOOKTITLE = {20th Annual International Society for Magnetic Resonance in Medicine (ISMRM) Scientific Meeting and Exhibition},
    YEAR = {2012},
    ADDRESS = {Melbourne, Australia},
    MONTH = {May 5-11} 
    }
    

  22. Y. Gal, S.E. Rose, P. Bourgeat, Z. Taylor, M. Fay, P. Thomas, N. Dowson, O. Salvado, and S. Crozier. Automatic classification of high grade brain tumour MRI for improved resection and therapy planning. In 20th Annual International Society for Magnetic Resonance in Medicine (ISMRM) Scientific Meeting and Exhibition, Melbourne, Australia, May 5-11 2012.
    @INPROCEEDINGS{Gal:ismrm1:12,
    author = {Gal, Y. and Rose, S.E. and Bourgeat, P. and Taylor, Z. and Fay, M. and Thomas, P. and Dowson, N. and Salvado, O. and Crozier, S. },
    title = {Automatic classification of high grade brain tumour MRI for improved resection and therapy planning},
    BOOKTITLE = {20th Annual International Society for Magnetic Resonance in Medicine (ISMRM) Scientific Meeting and Exhibition},
    YEAR = {2012},
    ADDRESS = {Melbourne, Australia},
    MONTH = {May 5-11} 
    }
    

  23. Yaniv Gal, Stephen Rose, Nicholas Dowson, Paul Thomas, Pierrick Bourgeat, Zeike Taylor, Mike Fay, Rosalind Jeffree, Olivier Salvado, and Stuart Crozier. Automated detection of high grade brain tumour tissue using a tissue classification strategy based on MR images. In Australian Biomedical Engineering Conference, Brisbane, pages , 2012. None.
    @inproceedings{uid46,
    address = {Brisbane},
    title = {Automated detection of high grade brain tumour tissue using a tissue classification strategy based on MR images},
    booktitle = {Australian Biomedical Engineering Conference},
    publisher = {None},
    author = {Gal, Yaniv and Rose, Stephen and Dowson, Nicholas and Thomas, Paul and Bourgeat, Pierrick and Taylor, Zeike and Fay, Mike and Jeffree, Rosalind and Salvado, Olivier and Crozier, Stuart},
    year = {2012},
    pages = {} 
    }
    

  24. Soumya Ghose, Jhimli Mitra, Arnau Oliver, Robert Marti, Xavier Lladó, Jordi Freixenet, Joan Carles Vilanova, Josep Comet, Desire Sidibé, and Fabrice Meriaudeau. A Supervised Learning Framework for Automatic Prostate Segmentation in Trans Rectal Ultrasound Images. In Advanced Concepts for Intelligent Vision Systems (ACIVS), volume 7517 of Lecture Notes in Computer Science, pages 190-200, 2012. Springer.
    @inproceedings{Ghose:2012a,
    author = {Soumya Ghose and Jhimli Mitra and Arnau Oliver and Robert Marti and Xavier Llad{\'o} and Jordi Freixenet and Joan Carles Vilanova and Josep Comet and Desire Sidib{\'e} and Fabrice Meriaudeau},
    title = {A Supervised Learning Framework for Automatic Prostate Segmentation in Trans Rectal Ultrasound Images},
    booktitle = {Advanced Concepts for Intelligent Vision Systems (ACIVS)},
    year = {2012},
    publisher = {Springer},
    series = {Lecture Notes in Computer Science},
    volume = {7517},
    year = {2012},
    pages = {190-200} 
    }
    

  25. Soumya Ghose, Jhimli Mitra, Arnau Oliver, Robert Martì, Xavier Lladó, Jordi Freixenet, Joan C. Vilanova, Josep Comet, Désiré Sidibé, and Fabrice Meriaudeau. Spectral Clustering of Shape and Probability Prior Models for Automatic Prostate Segmentation. In IEEE Conference of the Engineering in Medicine and Biology Society (EMBS), pages 2335-2338, 2012. IEEE.
    @inproceedings{Ghose:2012b,
    author ={Soumya Ghose and Jhimli Mitra and Arnau Oliver and Robert Mart\'i and Xavier Llad\'o and Jordi Freixenet and Joan C. Vilanova and Josep Comet and D\'esir\'e Sidib\'e and Fabrice Meriaudeau},
    title ={Spectral Clustering of Shape and Probability Prior Models for Automatic Prostate Segmentation},
    year ={2012},
    booktitle = {IEEE Conference of the Engineering in Medicine and Biology Society (EMBS)},
    pages = {2335-2338},
    publisher = {IEEE} 
    }
    

  26. Soumya Ghose, Jhimli Mitra, Arnau Oliver, Robert Martì, Xavier Lladó, Jordi Freixenet, Joan C. Vilanova, Josep Comet, Désiré Sidibé, and Fabrice Meriaudeau.. A Coupled Schema of Probabilistic Atlas and Statistical Shape and Appearance Model for 3D Prostate Segmentation in MR Images. In IEEE International Conference on Image Processing (ICIP), pages 541-544, 2012. IEEE.
    @inproceedings{Ghose:2012d,
    author ={Soumya Ghose and Jhimli Mitra and Arnau Oliver and Robert Mart\'i and Xavier Llad\'o and Jordi Freixenet and Joan C. Vilanova and Josep Comet and D\'esir\'e Sidib\'e and Fabrice Meriaudeau.},
    title ={A Coupled Schema of Probabilistic Atlas and Statistical Shape and Appearance Model for 3D Prostate Segmentation in MR Images},
    year ={2012},
    booktitle = {IEEE International Conference on Image Processing (ICIP)},
    pages = {541-544},
    publisher = {IEEE} 
    }
    

  27. Soumya Ghose, Jhimli Mitra, Arnau Oliver, Robert Martì, Xavier Lladó, Jordi Freixenet, Joan C. Vilanova, Josep Comet, Désiré Sidibé, and Fabrice Meriaudeau.. A Mumford-Shah functional based variational model with contour, shape and probability prior information for prostate segmentation. In IAPR International Conference on Pattern Recognition (ICPR), pages 121-124, 2012. IEEE.
    @inproceedings{Ghose:2012e,
    author ={Soumya Ghose and Jhimli Mitra and Arnau Oliver and Robert Mart\'i and Xavier Llad\'o and Jordi Freixenet and Joan C. Vilanova and Josep Comet and D\'esir\'e Sidib\'e and Fabrice Meriaudeau.},
    title ={A Mumford-Shah functional based variational model with contour, shape and probability prior information for prostate segmentation},
    year ={2012},
    booktitle = {IAPR International Conference on Pattern Recognition (ICPR)},
    pages = {121-124 },
    publisher = {IEEE} 
    }
    

  28. Soumya Ghose, Jhimli Mitra, Arnau Oliver, Robert Martì, Xavier Lladó, Jordi Freixenet, Joan C. Vilanova, Josep Comet, Désiré Sidibé, and Fabrice Meriaudeau.. Graph cut energy minimization in a probabilistic learning framework for 3D prostate segmentation in MRI. In IAPR International Conference on Pattern Recognition (ICPR), pages 125-128, 2012. IEEE.
    @inproceedings{Ghose:2012f,
    author ={Soumya Ghose and Jhimli Mitra and Arnau Oliver and Robert Mart\'i and Xavier Llad\'o and Jordi Freixenet and Joan C. Vilanova and Josep Comet and D\'esir\'e Sidib\'e and Fabrice Meriaudeau.},
    title ={Graph cut energy minimization in a probabilistic learning framework for 3D prostate segmentation in MRI},
    year ={2012},
    booktitle = {IAPR International Conference on Pattern Recognition (ICPR)},
    pages = {125-128},
    publisher = {IEEE} 
    }
    

  29. Soumya Ghose, Arnau Oliver, Robert Martì, Xavier Lladó, Jordi Freixenet, Jhimli Mitra, Joan C. Vilanova, Josep Comet, Désiré Sidibé, and Fabrice Meriaudeau. A hybrid framework of multiple active appearance models and global registration for 3D prostate segmentation in MRI. In SPIE Conference on Medical Imaging, volume 8314, pages 8314S1-8314S9, 2012. SPIE.
    @inproceedings{Ghose:2012c,
    author ={Soumya Ghose and Arnau Oliver and Robert Mart\'i and Xavier Llad\'o and Jordi Freixenet and Jhimli Mitra and Joan C. Vilanova and Josep Comet and D\'esir\'e Sidib\'e and Fabrice Meriaudeau},
    title ={A hybrid framework of multiple active appearance models and global registration for 3D prostate segmentation in MRI},
    year ={2012},
    booktitle = {SPIE Conference on Medical Imaging},
    volume = {8314},
    pages = {8314S1-8314S9},
    publisher = {SPIE} 
    }
    

  30. Lois Holloway, Jason Dowling, Karen Lim, Marion Dimigen, Shalini Vinod, and Nira Borok. How do software generated contours compare with a manually created consensus contour for definition of cervical cancer volumes on MRI?. In Faculty of Radiation Oncology 2012 Annual Scientific Meeting, Cairns, QLD, pages 226-256, 2012. Wiley-Blackwell.
    @inproceedings{uid27,
    address = {Cairns, QLD},
    title = {How do software generated contours compare with a manually created consensus contour for definition of cervical cancer volumes on MRI?},
    booktitle = {Faculty of Radiation Oncology 2012 Annual Scientific Meeting},
    publisher = {Wiley-Blackwell},
    author = {Holloway, Lois and Dowling, Jason and Lim, Karen and Dimigen, Marion and Vinod, Shalini and Borok, Nira},
    year = {2012},
    pages = {226-256} 
    }
    

  31. Lois Holloway, Jason Dowling, Karen Lim, Shalini Vinod, Marion Dimigen, and Nira Borok. Do mathematical concensus contours match observer consensus contours? : A study in cervical cancer volumes on MRI. In 2012 Engineering and Physical Sciences in Medicine, Gold Coast, pages , 2012. Springer.
    @inproceedings{uid41,
    address = {Gold Coast},
    title = {Do mathematical concensus contours match observer consensus contours? : A study in cervical cancer volumes on MRI},
    booktitle = {2012 Engineering and Physical Sciences in Medicine },
    publisher = {Springer},
    author = {Holloway, Lois and Dowling, Jason and Lim, Karen and Vinod, Shalini and Dimigen, Marion and Borok, Nira},
    year = {2012},
    pages = {} 
    }
    

  32. L. Holloway, J. Dowling, K. Lim, S. Vinod, M. Dimigen, and N. Borok. How do software generated contours compare with a manually created consensus contour for definition of cervical cancer volumes on MRI?. In Proceedings of the RANZCR Faculty of Radiation Oncology Annual Scientific Meeting, Cairns, Queensland, Australia, pages Accepted, In Press, 2012.
    @INPROCEEDINGS{Holloway2012FRO,
    author = {Holloway, L. and Dowling, J. and Lim, K. and Vinod, S. and Dimigen, M. and Borok, N.},
    title = {How do software generated contours compare with a manually created consensus contour for definition of cervical cancer volumes on MRI?},
    booktitle = {Proceedings of the RANZCR Faculty of Radiation Oncology Annual Scientific Meeting, Cairns, Queensland, Australia },
    year = {2012},
    pages = {Accepted, In Press} 
    }
    

  33. Michael Jameson, J de Leon, A. Windsor, K. Cloak, Jason Dowling, Shakes Chandra, Phil Vial, M Sidhom, Lois Holloway, and Peter Metcalfe. Endorectal balloons in the post prostatectomy setting: Do gains in stability lead to more predictable dosimetry. In 2012 Engineering and Physical Sciences in Medicine, Gold Coast, pages , 2012. EPSM.
    @inproceedings{uid25,
    address = {Gold Coast},
    title = {Endorectal balloons in the post prostatectomy setting: Do gains in stability lead to more predictable dosimetry},
    booktitle = {2012 Engineering and Physical Sciences in Medicine},
    publisher = {EPSM},
    author = {Jameson, Michael and de Leon, J and Windsor, A. and Cloak, K. and Dowling, Jason and Chandra, Shakes and Vial, Phil and Sidhom, M and Holloway, Lois and Metcalfe, Peter},
    year = {2012},
    pages = {} 
    }
    

  34. Emilio Loren Roth Monzon, Amine Chellali, Cedric Dumas, and Caroline Cao. Training effects of a visual aid on haptic sensitivity in a needle insertion task. In Proceedings of IEEE Haptics Symposium 2012, Vancouver, Canada, pages 199-202, March 2012.
    @InProceedings{dumas:haptic:12,
    author = {{Loren Roth Monzon}, Emilio and Chellali, Amine and Dumas, Cedric and Cao, Caroline},
    title = {Training effects of a visual aid on haptic sensitivity in a needle insertion task},
    booktitle = {Proceedings of IEEE Haptics Symposium 2012},
    address = {Vancouver, Canada},
    year = {2012},
    month = {March},
    pages = {199-202},
    doi = {10.1109/HAPTIC.2012.6183791} 
    }
    

  35. Jhimli Mitra, Soumya Ghose, Désiré Sidibé, Robert Martì, Xavier Lladó, Arnau Oliver, Joan C. Vilanova, Josep Comet, and Fabrice Meriaudeau. Joint Probability of Shape and Image Similarities to Retrieve 2D TRUS-MR Slice Correspondence for Prostate Biopsy. In IEEE Engineering in Medicine and Biology Society (EMBS) Conference, pages 5416-5419, Aug. 2012.
    @INPROCEEDINGS{MitraEMBS2012,
    author = "Jhimli Mitra and Soumya Ghose and D{\'e}sir{\'e} Sidib{\'e} and Robert Mart{\'i} and Xavier Llad{\'o} and Arnau Oliver and Joan C. Vilanova and Josep Comet and Fabrice Meriaudeau",
    title = "Joint Probability of Shape and Image Similarities to Retrieve 2{D} {TRUS-MR} Slice Correspondence for Prostate Biopsy",
    booktitle={IEEE Engineering in Medicine and Biology Society (EMBS) Conference},
    year={2012},
    month={Aug.},
    volume={},
    number={},
    pages={5416--5419} 
    }
    

  36. Jhimli Mitra, Soumya Ghose, Désiré Sidibé, Arnau Oliver, Robert Martì, Xavier Lladó, Joan C. Vilanova, Josep Comet, and Fabrice Meriaudeau. Weighted Likelihood Function of Multiple Statistical Parameters to Retrieve 2D TRUS-MR Slice Correspondence for Prostate Biopsy. In International Conference on Image Processing (ICIP), pages xx-xx, Sep. 2012.
    @INPROCEEDINGS{MitraICIP2012,
    author = "Jhimli Mitra and Soumya Ghose and D{\'e}sir{\'e} Sidib{\'e} and Arnau Oliver and Robert Mart{\'i} and Xavier Llad{\'o} and Joan C. Vilanova and Josep Comet and Fabrice Meriaudeau",
    title = "Weighted Likelihood Function of Multiple Statistical Parameters to Retrieve 2{D} {TRUS-MR} Slice Correspondence for Prostate Biopsy",
    booktitle={International Conference on Image Processing (ICIP)},
    year={2012},
    month={Sep.},
    volume={},
    number={},
    pages={xx--xx} 
    }
    

  37. Jhimli Mitra, Zoltan Kato, Soumya Ghose, Désiré Sidibé, Robert Martì, Arnau Oliver, Xavier Lladó, Joan C. Vilanova, and Fabrice Meriaudeau. Spectral clustering to model deformations for fast multimodal prostate registration. In 21st International Conference on Pattern Recognition (ICPR), pages 2622-2625, Nov. 2012.
    @INPROCEEDINGS{MitraICPR2012,
    author = "Jhimli Mitra and Zoltan Kato and Soumya Ghose and D{\'e}sir{\'e} Sidib{\'e} and Robert Mart{\'i} and Arnau Oliver and Xavier Llad{\'o} and Joan C. Vilanova and Fabrice Meriaudeau",
    title = "Spectral clustering to model deformations for fast multimodal prostate registration",
    booktitle={21st International Conference on Pattern Recognition (ICPR)},
    year={2012},
    month={Nov.},
    volume={},
    number={},
    pages={2622--2625} 
    }
    

  38. Jhimli Mitra, Abhilash Srikantha, Désiré Sidibé, Robert Martì, Arnau Oliver, Xavier Lladó, Soumya Ghose, Joan C. Vilanova, Josep Comet, and Fabrice Meriaudeau. A shape-based statistical method to retrieve 2D TRUS-MR slice correspondence for prostate biopsy. In SPIE Medical Imaging: Image Processing, volume 8314, pages 83143M.1-9, Feb. 2012.
    @INPROCEEDINGS{MitraSPIE2012,
    author = "Jhimli Mitra and Abhilash Srikantha and D{\'e}sir{\'e} Sidib{\'e} and Robert Mart{\'i} and Arnau Oliver and Xavier Llad{\'o} and Soumya Ghose and Joan C. Vilanova and Josep Comet and Fabrice Meriaudeau",
    title = "A shape-based statistical method to retrieve 2{D} {TRUS-MR} slice correspondence for prostate biopsy",
    booktitle={SPIE Medical Imaging: Image Processing},
    year={2012},
    month={Feb.},
    volume={8314},
    number={},
    pages={83143M.1--9} 
    }
    

  39. David Raffelt, J. Donald Tournier, Stuart Crozier, Kathryn Ellis, Ralph Martins, Victor Villemagne, Colin Masters, David Ames, Christopher Rowe, Olivier Salvado, and Alan Connelly. Apparent fibre density: A novel MRI approach that identifies specific white matter tracts affected in Alzheimer's disease and MCI. In , volume 8, pages P61, July 2012.
    @inproceedings{raffelt_apparent_2012,
    title = {Apparent fibre density: A novel {MRI} approach that identifies specific white matter tracts affected in Alzheimer's disease and {MCI}},
    volume = {8},
    url = {http://linkinghub.elsevier.com/retrieve/pii/S1552526012002749?showall=true},
    number = {4},
    journal = {Alzheimer's \& dementia : the journal of the Alzheimer's Association},
    author = {Raffelt, David and Tournier, J. Donald and Crozier, Stuart and Ellis, Kathryn and Martins, Ralph and Villemagne, Victor and Masters, Colin and Ames, David and Rowe, Christopher and Salvado, Olivier and Connelly, Alan},
    month = "July",
    year = {2012},
    pages = {P61} 
    }
    

  40. Parnesh Raniga, Kai Wong, J-Donald Tournier, Alan Connelly, and Olivier Salvado. GPU Accelerated CSD-based Probabilistic Tractography. In ISMRM Annual Meeting, Melbourne, pages , 2012. International Society for Magnetic Ressonance in Medicine.
    @inproceedings{uid5,
    address = {Melbourne},
    title = {GPU Accelerated CSD-based Probabilistic Tractography},
    booktitle = {ISMRM Annual Meeting},
    publisher = {International Society for Magnetic Ressonance in Medicine},
    author = {Raniga, Parnesh and Wong, Kai and Tournier, J-Donald and Connelly, Alan and Salvado, Olivier},
    year = {2012},
    pages = {} 
    }
    

  41. Christopher Rowe, Kathryn Ellis, Belinda Brown, Pierrick Bourgeat, Noel Faux, Ralph Martins, Olivier Salvado, Colin Masters, David Ames, and Victor Villemagne. Cognition, hippocampal volume and fibrillar A? burden as predictors of cognitive decline: Three-year follow-up results from AIBL. In , volume 8, pages P433, July 2012.
    @inproceedings{rowe_cognition_2012,
    title = {Cognition, hippocampal volume and fibrillar A? burden as predictors of cognitive decline: Three-year follow-up results from {AIBL}},
    volume = {8},
    url = {http://linkinghub.elsevier.com/retrieve/pii/S1552526012012861?showall=true},
    number = {4},
    journal = {Alzheimer's \& dementia : the journal of the Alzheimer's Association},
    author = {Rowe, Christopher and Ellis, Kathryn and Brown, Belinda and Bourgeat, Pierrick and Faux, Noel and Martins, Ralph and Salvado, Olivier and Masters, Colin and Ames, David and Villemagne, Victor},
    month = "July",
    year = {2012},
    pages = {P433} 
    }
    

  42. Kaikai Shen, Pierrick Bourgeat, Jurgen Fripp, Fabrice Meriaudeau, and Olivier Salvado. Consistent estimation of shape parameters in statistical shape model by symmetric EM algorithm. In Medical Imaging 2012: Image Processing, volume 8314, San Diego, California, USA, pages 83140R, 2012. SPIE.
    @inproceedings{shen_consistent_2012,
    address = {San Diego, California, {USA}},
    title = {Consistent estimation of shape parameters in statistical shape model by symmetric {EM} algorithm},
    url = {http://dx.doi.org/10.1117/12.911746},
    booktitle = {Medical Imaging 2012: Image Processing},
    publisher = {{SPIE}},
    author = {Kaikai Shen and Pierrick Bourgeat and Jurgen Fripp and Fabrice Meriaudeau and Olivier Salvado},
    year = {2012},
    volume = {8314},
    pages = {83140R} 
    }
    

  43. Xavier Sirault, Anthony Paproki, Jurgen Fripp, Jianming Guo, Helen Daily, Ron Li, Chuong Nguyen, and Robert Furbank. 3D plant analysis over time: understanding plant architecture, growth and function using imaging technologies. In PhenoDays 2012, pages 555 -560, October 2012.
    @INPROCEEDINGS{SiraultPhenoday,
    author={Sirault, Xavier and Paproki, Anthony and Fripp, Jurgen and Guo, Jianming and Daily, Helen and Li, Ron and Nguyen, Chuong and Furbank, Robert },
    booktitle={PhenoDays 2012},
    title={3D plant analysis over time: understanding plant architecture, growth and function using imaging technologies},
    year={2012},
    month={Oct},
    volume={},
    number={},
    pages={555 -560},
    ,
    
    }
    

  44. Jidi Sun, Jason Dowling, Fred Menk, Peter Stanwell, Olivier Salvado, Joel Parker, and Peter Greer. Investigation on CIVCO coil mount for MR-based prostate treatment planning. In 2012 Engineering and Physical Sciences in Medicine, Gold Coast, pages , 2012. Springer.
    @inproceedings{uid36,
    address = {Gold Coast },
    title = {Investigation on CIVCO coil mount for MR-based prostate treatment planning},
    booktitle = {2012 Engineering and Physical Sciences in Medicine},
    publisher = {Springer},
    author = {Sun, Jidi and Dowling, Jason and Menk, Fred and Stanwell, Peter and Salvado, Olivier and Parker, Joel and Greer, Peter},
    year = {2012},
    pages = {} 
    }
    

  45. Victor Villemagne, Kathryn Ellis, Gaël Chetelat, Belinda Brown, Pierrick Bourgeat, Gareth Jones, Ralph Martins, Olivier Salvado, David Ames, Colin Masters, and Christopher Rowe. Relation between rates of A? deposition, APOE genotype and cognition: Results from a 3- to 5-year longitudinal study. In , volume 8, pages P113, July 2012.
    @inproceedings{villemagne_relation_2012,
    title = {Relation between rates of A? deposition, {APOE} genotype and cognition: Results from a 3- to 5-year longitudinal study},
    volume = {8},
    url = {http://linkinghub.elsevier.com/retrieve/pii/S1552526012004256?showall=true},
    number = {4},
    journal = {Alzheimer's \& dementia : the journal of the Alzheimer's Association},
    author = {Villemagne, Victor and Ellis, Kathryn and Chetelat, Gaël and Brown, Belinda and Bourgeat, Pierrick and Jones, Gareth and Martins, Ralph and Salvado, Olivier and Ames, David and Masters, Colin and Rowe, Christopher},
    month = "July",
    year = {2012},
    pages = {P113} 
    }
    

  46. Brendan Whelan, Jason Dowling, S Kumar, Karen Lim, J Begg, Peter Greer, Shalini Vinod, Lois Holloway, and Olivier Salvado. The impact of utilising inaccurate Electron Density data for IMRT of cervical cancer patients. In 2012 Engineering and Physical Sciences in Medicine, Gold Coast, pages , 2012. Wiley-Blackwell.
    @inproceedings{uid37,
    address = {Gold Coast},
    title = {The impact of utilising inaccurate Electron Density data for IMRT of cervical cancer patients},
    booktitle = {2012 Engineering and Physical Sciences in Medicine},
    publisher = {Wiley-Blackwell},
    author = {Whelan, Brendan and Dowling, Jason and Kumar, S and Lim, Karen and Begg, J and Greer, Peter and Vinod, Shalini and Holloway, Lois and Salvado, Olivier},
    year = {2012},
    pages = {} 
    }
    

  47. Brendan Whelan, S Kumar, Jason Dowling, Jonathon Lambert, Karen Lim, Olivier Salvado, J Begg, Peter Greer, Shalini Vinod, and Lois Holloway. Requirements for the Accuracy of Electron Density Data Planning for MRI Based Cervix Cancer Treatment Planning. In American Association of Physicists in Medicine 2012, Charlotte, NC, USA, pages , 2012. AAPAM.
    @inproceedings{uid14,
    address = {Charlotte, NC, USA},
    title = {Requirements for the Accuracy of Electron Density Data Planning for MRI Based Cervix Cancer Treatment Planning},
    booktitle = {American Association of Physicists in Medicine 2012 },
    publisher = {AAPAM},
    author = {Whelan, Brendan and Kumar, S and Dowling, Jason and Lambert, Jonathon and Lim, Karen and Salvado, Olivier and Begg, J and Greer, Peter and Vinod, Shalini and Holloway, Lois},
    year = {2012},
    pages = {} 
    }
    

  48. B. Whelan, S. Kumar, J. Dowling, J. Lambert, K. Lim, O. Salvado, J. Begg, P. Greer, S. Vinod, and L. Holloway. Requirements for the Accuracy of Electron Density Data Planning for MRI Based Cervix Cancer Treatment Planning. In Proceedings of the American Association of Physicists in Medicine, Charlotte, North Carolina, pages Accepted, In Press, 2012.
    @INPROCEEDINGS{Whelan2012AAPM,
    author = {Whelan, B. and Kumar, S. and Dowling, J. and Lambert, J. and Lim, K. and Salvado, O. and Begg, J. and Greer, P. and Vinod, S. and Holloway, L.},
    title = {Requirements for the Accuracy of Electron Density Data Planning for MRI Based Cervix Cancer Treatment Planning},
    booktitle = {Proceedings of the American Association of Physicists in Medicine, Charlotte, North Carolina},
    year = {2012},
    pages = {Accepted, In Press} 
    }
    

  49. Paul Yates, Patricia Desmond, Parnesh Raniga, Pramit Phal, Christopher Steward, Olivier Salvado, Ralph Martins, Simon Salinas, Kathryn Ellis, Cassandra Szoeke, Colin Masters, David Ames, Victor Villemagne, and Christopher Rowe. Incidence and associations of lobar microbleeds: Results from the Australian Imaging, Biomarkers and Lifestyle Study of Ageing (AIBL). In , volume 8, pages P616-P617, July 2012.
    @inproceedings{yates_incidence_2012,
    title = {Incidence and associations of lobar microbleeds: Results from the Australian Imaging, Biomarkers and Lifestyle Study of Ageing {(AIBL)}},
    volume = {8},
    url = {http://linkinghub.elsevier.com/retrieve/pii/S1552526012017773?showall=true},
    number = {4},
    journal = {Alzheimer's \& dementia : the journal of the Alzheimer's Association},
    author = {Yates, Paul and Desmond, Patricia and Raniga, Parnesh and Phal, Pramit and Steward, Christopher and Salvado, Olivier and Martins, Ralph and Salinas, Simon and Ellis, Kathryn and Szoeke, Cassandra and Masters, Colin and Ames, David and Villemagne, Victor and Rowe, Christopher},
    month = "July",
    year = {2012},
    pages = {P616--P617} 
    }
    

  50. L. Zhou, V. Dore, J. Fripp, P. Bourgeat, P. Raniga, R. Martins, S.L. Macaulay, C. Masters, D. Ames, K. A. Ellis, V. Villemagne, C. Rowe, O. Salvado, and Aibl research group. MRI-independent Automated Surface-projection of Amyloid imaging scans. In Alzheimer's Association International Conference in Alzheimer's Disease 2012, Vancouver, Canada, July 14-19 2012. Alzheimer's Association.
    @INPROCEEDINGS{Zhou:icad:12,
    author = {Zhou, L. and Dore, V. and Fripp, J. and Bourgeat, P. and Raniga, P., and Martins, R. and Macaulay, S.L. and Masters, C. and Ames, D. and Ellis, K. A. and Villemagne, V. and Rowe, C. and Salvado, O. and {Aibl} research group},
    title = {MRI-independent Automated Surface-projection of Amyloid imaging scans },
    BOOKTITLE = {Alzheimer's Association International Conference in Alzheimer's Disease 2012},
    YEAR = {2012},
    ADDRESS = {Vancouver, Canada},
    MONTH = {July 14-19},
    PUBLISHER = {Alzheimer's Association},
    
    }
    

  51. L. Zhou, O. Salvado, V. Dore, P. Bourgeat, P. Raniga, V. Villemagne, C. Rowe, and J. Fripp. Surface-based Amyloid Estimation without MRI by Subject-specific Atlas Selection and Bayesian Fusion. In 15th International Conference on Medical Image Computing And Computer-Assisted Intervention (MICCAI'12), LNCS, Nice, France, October 1-5 2012. Springer Verlag.
    @InProceedings{zhou:miccai:2012,
    Author = {Zhou, L. and Salvado, O. and Dore, V. and Bourgeat, P. and Raniga, P. and Villemagne, V. and Rowe, C. and Fripp, J.},
    Title = {Surface-based Amyloid Estimation without MRI by Subject-specific Atlas Selection and Bayesian Fusion},
    BookTitle = {15th International Conference on Medical Image Computing And Computer-Assisted Intervention (MICCAI'12)},
    Series = {LNCS},
    Address = {Nice, France},
    Publisher = {Springer Verlag},
    month = {October 1-5},
    year = 2012 
    }
    

  52. J de Leon, Michael Jameson, A. Windsor, K. Cloak, S. Keats, Jason Dowling, Shakes Chandra, Lois Holloway, Phil Vial, Peter Metcalfe, and M Sidhom. Superior target volume and organ stability with the use of endorectal balloons in post prostatectomy radiotherapy: the first reported Australian study. In RANZCR Faculty of Radiation Oncology Annual Scientific Meeting, Cairns, pages ï, 2012. Wiley-Blackwell.
    @inproceedings{uid24,
    address = {Cairns},
    title = {Superior target volume and organ stability with the use of endorectal balloons in post prostatectomy radiotherapy: the first reported Australian study},
    booktitle = {RANZCR Faculty of Radiation Oncology Annual Scientific Meeting},
    publisher = {Wiley-Blackwell},
    author = {de Leon, J and Jameson, Michael and Windsor, A. and Cloak, K. and Keats, S. and Dowling, Jason and Chandra, Shakes and Holloway, Lois and Vial, Phil and Metcalfe, Peter and Sidhom, M},
    year = {2012},
    pages = {ï} 
    }
    

  53. H. de Visser, N. Yu, N. Good, A. Hill, and M. Watson. Prediction of aptitude for colonoscope tip control. In SimHealth, Sydney, Australia, September 11-14 2012.
    @InProceedings{deVisser:SimHealth:12,
    author = {de Visser, H. and Yu, N. and Good, N. and Hill, A. and Watson, M.},
    title = {Prediction of aptitude for colonoscope tip control},
    booktitle = {SimHealth},
    address = {Sydney, Australia},
    year = {2012},
    month = {September 11-14} 
    }
    


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