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Publications of year 2010

Books and proceedings

  1. A. Madabhushi, J. Dowling, P. Yan, A. Fenster, P. Abolmaesumi, and N. Hata. MICCAI 2010 Workshop on Prostate Cancer Imaging: Computer-Aided Diagnosis, Prognosis, and Intervention, volume 6367 . Springer LNCS, 2010. [bibtex-entry]

Thesis

  1. Shekhar Suresh Chandra. Circulant Theory of the Radon Transform. PhD thesis, School of Physics, Monash University, 2010.
    Note: Passed without changes. [bibtex-entry]

Articles in journal or book chapters

  1. P. Bourgeat, G. Chételat, V. Villemagne, J. Fripp, P. Raniga, K. Pike, O. Acosta, C. Szoeke, S. Ourselin, D. Ames, K. Ellis, R. Martins, C. Masters, C. Rowe, O. Salvado, and the AIBL Research Group. AB burden in the temporal neocortex is related to hippocampal atrophy in elderly subjects without dementia. Neurology, 74(2):121--127, January 2010. [bibtex-entry]

  2. Shekhar Suresh Chandra. Exact image representation via a Number-Theoretic Radon Transform. IET Computer Vision, In Peer Review, submitted April, 2010. [bibtex-entry]

  3. Shekhar Suresh Chandra. Fast Digital Convolution using Bit-Shifts. Signal Processing Letters, Submitted May, Available on arXiv.org, 2010.
    Note: ArXiv:1005.1497v1 [cs.NA]. [bibtex-entry]

  4. Shekhar S. Chandra, Nicolas Normand, Andrew Kingston, Jean-Pierre Guédon, and Imants Svalbe. Fast Mojette Transform for Discrete Tomography. Journal of Mathematical Imaging and Vision, Submitted December (in Review), Available on arXiv.org, 2010.
    Note: ArXiv:1006.1965v1 [physics.med-ph]. [bibtex-entry]

  5. Amine Chellali, Cedric Dumas, and Isabelle Milleville. Influences of Haptic Communication on a Shared Manual Task. Interacting with Computers, 2010.
    Note: Accepted. [bibtex-entry]

  6. G. Chételat, V. Villemagne, P. Bourgeat, K. Pike, G. Jones, D. Ames, K. Ellis, C. Szoeke, R. Martins, G. O'Keefe, O. Salvado, C. Masters, C. Rowe, and the AIBL Research Group. Relationship between atrophy and B-amyloid deposition in Alzheimer's disease. Annals of Neurology, 67(3):317--324, March 2010. [bibtex-entry]

  7. G. Chételat, V. Villemagne, K. Pike, J-C. Baron, P. Bourgeat, G. Jones, KA. Ellis, O. Salvado, C. Szoeke, R. Martins, D. Ames, C. Masters, and C. Rowe. Larger temporal volume in elderly with high versus low beta-amyloid deposition. Brain, 133(11):3336--3348, November 2010. [bibtex-entry]

  8. Kathryn A. Ellis, Christopher C. Rowe, Victor L. Villemagne, Ralph N. Martins, Colin L. Masters, Olivier Salvado, Cassandra Szoeke, and David Ames. Addressing population aging and Alzheimer's disease through the Australian Imaging Biomarkers and Lifestyle study: Collaboration with the Alzheimer's Disease Neuroimaging Initiative. Alzheimer's and Dementia, 6(3):291-296 , May 2010. [bibtex-entry]

  9. C. Engstrom, J. Fripp, V. Jurcack, O. Salvado, and S. Crozier. Segmentation of the quadratus lumborum muscle using statistical shape modeling. Journal of MRI, 2010.
    Note: Accepted . [bibtex-entry]

  10. J. Fripp, S. Crozier, S.K. Warfield, and S. Ourselin. Automatic Segmentation and Quantitative Analysis of the Articular Cartilages from Magnetic Resonance Images of the Knee. IEEE Transactions on Medical Imaging, 29(1):55-64 , January 2010. [bibtex-entry]

  11. P. Guitera, P. Bourgeat, J.R. Stretch, R.A. Scolyer, S. Ourselin, C. Lean, J.F. Thompson, and R. Bourne. Diagnostic value of 8.5T magnetic resonance spectroscopy of benign and malignant skin lesion biopsies. Melanoma Research, 20(4):311--317, August 2010. [bibtex-entry]

  12. Phan Tien Nguyen, Olivier Salvado, Ian Brent Masters, Camile S. Farah, and David Fielding. Combining Autofluorescence and Narrow Band Imaging With Image Analysis in the Evaluation of Preneoplastic Lesions in the Bronchus and Larynx. Journal of Bronchology, 17(2):109-116 , 2010. [bibtex-entry]

  13. C. Rowe, K. Ellis, M. Rimajova, P. Bourgeat, K.E. Pike, G. Jones, J. Fripp, H. Tochon-Danguy, L. Morandeau, G. O'Keefe, R. Price, P. Raniga, P. Robins, O. Acosta, N. Lenzo, C. Szoeke, O. Salvado, R. Head, R. Martins, C.L. Masters, D. Ames, and V.L. Villemagne. Amyloid imaging results from the Australian imaging, biomarkers and lifestyle study of ageing (AIBL). Neurobiology of Aging, 31(8):1275--1283, August 2010. [bibtex-entry]

  14. Andrea Rueda, Oscar Acosta, Michel Couprie, Pierrick Bourgeat, Jurgen Fripp, Nicholas Dowson, Eduardo Romero, and Olivier Salvado. Topology-corrected segmentation and local intensity estimates for improved partial volume classification of brain cortex in MRI. Journal of Neuroscience Methods, 188(2):305-315, May 2010. [bibtex-entry]

  15. V. Villemagne, K. Perez, K. Pike, W. Kok, C. Rowe, A. White, P. Bourgeat, O. Salvado, J. Bedo, C. Hutton, N. Faux, C. Masters, and K. Barnham. Blood borne AB dimer correlates with clinical markers of Alzheimer's disease. Journal of Neurosciences, 30(18):6315--6322, May 2010. [bibtex-entry]

  16. D. Xiao, D. Zahra, P. Bourgeat, P. Berghofer, O. Acosta , C. Winberley, M.C. Gregoire, and O. Salvado. An improved 3D shape context based non-rigid registration method and its application to small animal skeletons registration. Computerized Medical Imaging and Graphics, 34(4):321-332, June 2010. [bibtex-entry]

  17. L. Zhou, L. Wang, and C. Shen. Feature Selection with Redundancy-constrained Class Separability. IEEE Transactions on Neural Networks, 21(5):853--858, 2010. [bibtex-entry]

  18. H. de Visser, J. Passenger, D. Conlan, C. Russ, D. Hellier, M. Cheng, O. Acosta, S. Ourselin, and O. Salvado. Developing a Next Generation Colonoscopy Simulator. Int J Image Graphics, 10(2):203-17, 2010. [bibtex-entry]

Conference articles

  1. O. Acosta, J. Dowling, G. Cazoulat, A. Simon, O. Salvado, R. de Crevoiser, and P. Haigron. Atlas Based Segmentation and Mapping of Organs at Risk from Planning CT for the Development of Voxel-Wise Predictive Models of Toxicity in Prostate Radiotherapy. In MICCAI 2010 Workshop on Prostate Cancer Imaging: Computer-Aided Diagnosis, Prognosis, and Intervention, volume 6367 , pages 42-51, 2010. Springer LNCS. [bibtex-entry]

  2. Oscar Acosta, Jurgen Fripp, Andrea Rueda, Di Xiao, Erik Bonner, Pierrick Bourgeat, and Olivier Salvado. 3D shape context surface registration for cortical mapping. In 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Rotterdam, The Netherlands, pages 1021--1024, 14-17 April 2010 . IEEE. [bibtex-entry]

  3. Neil Burdett, Jurgen Fripp, Pierrick Bourgeat, and Olivier Salvado. MILXView: A Medical Imaging, Analysis and Visualization Platform. In IFIP Advances in Information and Communication Technology, volume 335, pages 177, 2010. Springer. [bibtex-entry]

  4. Amine Chellali, Cédric Dumas, and Isabelle Milleville. Haptic communication to enhance collaboration in virtual environments. In Proceedings of the 28th Annual European Conference on Cognitive Ergonomics, ECCE '10, Delft, Netherlands, pages 83–90 , August 2010. ACM.
    Note: ACM ID: 1962319. [Abstract] [bibtex-entry]

  5. Amine Chellali, Cedric Dumas, and Isabelle Milleville. WYFIWIF: A Haptic Communication Paradigm for Collaborative Motor Skills Learning. In Proceedings of the Web Virtual Reality and Three-Dimensional Worlds, Freiburg, Germany, July 2010. [bibtex-entry]

  6. G. Chételat, V. Villemagne, K. Pike, J-C. Baron, P. Bourgeat, G. Jones, K. Ellis, O Salvado, C. Szoeke, R. Martins, D. Ames, C. Masters, and C. Rowe. Larger temporal volume in asymptomatic elderly with high versus low beta-amyloid deposition. In 13th International Conference on Alzheimer's Disease, Honolulu, Hawaii, July 10-15 2010. . [bibtex-entry]

  7. T.R. Coles, D.A. Gould, N.W. John, and D.G. Caldwell. The Case for Augmented Reality when Training in a Virtual Medical Environment. In Workshop of Medical Virtual Environments at IEEEVR2010, 2010 . [bibtex-entry]

  8. T.R. Coles, D.A. Gould, N.W. John, and D.G. Caldwell. Virtual Femoral Palpation Simulation for Interventional Radiology Training. In EG UK Theory and Practice of Computer Graphics, pages 123-126, 2010 . [bibtex-entry]

  9. T.R. Coles and N.W. John. The Effectiveness of Commercial Haptic Devices for Use in Virtual Needle Insertion Training Simulations. In Advances in Computer-Human Interaction, 2010, Third International Conference on, pages 148-153, 2010 . [bibtex-entry]

  10. O. Comas, S. Cotin, and C. Duriez. A Shell Model for Real-Time Simulation of Intra-ocular Implant Deployment. In Proceedings of ISBMS 2010, Phoenix, United States , pages 160--170, January 23-24 2010. [bibtex-entry]

  11. O. Comas, C. Duriez, and S. Cotin. Shell Model for Reconstruction and Real-Time Simulation of Thin Anatomical Structures. In Proceedings of MICCAI 2010, Bejing, China, September 20-24 2010.
    Note: Accepted . [bibtex-entry]

  12. J. Dowling, J. Lambert, J. Parker, J. Fripp, J. Denham, C. Wratten, P. Bourgeat, C Tang, O. Salvado, and P.B. Greer. Feasibility of Atlas Based Organ Segmentation and Electron Density Mapping for MRI Based Prostate Radiation Therapy Planning. In Fifty sixth annual meeting of the Canadian Organization of Medical Physicists and the Canadian College of Physicists in Medicine, volume 37 , pages 3907, 2010. Medical Physics. [bibtex-entry]

  13. J. Dowling, J. Lambert, J. Parker, P.B. Greer, J. Fripp, J. Denham, S. Ourselin, and O. Salvado. Automatic MRI atlas-based external beam radiation therapy treatment planning for prostate cancer. In MICCAI 2010 Workshop on Prostate Cancer Imaging: Computer-Aided Diagnosis, Prognosis, and Intervention, volume 6367 , pages 25-33, 2010. Springer LNCS. [bibtex-entry]

  14. Nicholas Dowson, Pierrick Bourgeat, S. Rose and M. Daglish, J. Smith, M. Fay, A. Coulthard , C. Winter, D. MacFarlane, and P. Thomas and O. Salvado. Joint Factor and Kinetic Analysis of Dynamic FDOPA PET Scans of Brain Cancer Patients.. In Tianzi Jiang, Nassir Navab, and Max Pluim, Josien and Viergever, editors, Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2010, volume 6362 of Lecture Notes in Computer Science, pages 185-192, 2010 . Springer. [bibtex-entry]

  15. N. Dowson and O. Salvado. Compact Rotation Invariant Descriptors for Non-Local Means. In Proc. of SPIE Image Processing, volume 7623-173, San Diego, CA, USA, pages 8, February 2010. [bibtex-entry]

  16. Florence Gris, Jean-Marie Favreau, Oscar Acosta, Vincent Barra, and Olivier Salvado. A combined voxel and surface based method for topology correction of brain surfaces. In Proceedings of SPIE: Image Processing, volume 7623-173, San Diego,CA, USA, pages 8p, February 2010 . [bibtex-entry]

  17. Kelvin Leung, Kai-Kai Shen, Josephine Barnes, Gerard Ridgway, Matthew Clarkson, Jurgen Fripp, Olivier Salvado, Fabrice Meriaudeau, Nick Fox, Pierrick Bourgeat, and Sébastien Ourselin. Increasing Power to Predict Mild Cognitive Impairment Conversion to Alzheimer's Disease Using Hippocampal Atrophy Rate and Statistical Shape Models. In Tianzi Jiang, Nassir Navab, Josien Pluim, and Max Viergever, editors, Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2010, volume 6362 of Lecture Notes in Computer Science, pages 125-132, 2010 . Springer. [bibtex-entry]

  18. K. Pannek, J. Mathias, J. Taylor, P. Raniga, O. Salvado, and S. Rose. Assessment of the Reproducibility of HARDI Tractography based Cortical Connectivity Measures suitable for Clinical Populations using a Bootstrap Approach. In Proceedings of the 18th International Society of Magnetic Resonance in Medicine (ISMRM) Scientific Meeting, Stockholm, Sweden, May 1-7 2010. [bibtex-entry]

  19. David Raffelt, Stuart Crozier, Alan Connelly, Olivier Salvado, and J-Donald Tournier. Apparent Fibre Density: A New Measure for High Angular Resolution Diffusion-Weighted Image Analysis. In Proceedings of International Society for Magnetic Resonance in Medicine, Stockholm, Sweden, May 2010 . [bibtex-entry]

  20. David Raffelt, J-Donald Tournier, Jurgen Fripp, Stuart Crozier, Alan Connelly, and Olivier Salvado. Symmetric Diffeomorphic Normalisation of Fibre Orientation Distributions. In Proceedings of International Society for Magnetic Resonance in Medicine, Stockholm, Sweden, May 2010 . [bibtex-entry]

  21. P. Raniga, J. Fripp, O. Acosta, P. Bourgeat, C Szoeke, G O'Keefe, K. Ellis, R. Martins, G Chetelat, V. Villemagne, C. Masters, D. Ames, C. Rowe, and O. Salvado. Effects of partial volume correction on the analysis of 11C-PiB PET in assessing Alzheimer's disease. In Alzheimer's Association International Conference in Alzheimer's Disease 2010, Honolulu, USA, July 10-15 2010. Alzheimer's Association . [bibtex-entry]

  22. P. Raniga, K. Pannek, J. Fripp, D. Raffelt, P. Bourgeat, O. Acosta, D. Tournier, A. Connelly, S. Rose, and O. Salvado. A Monte-Carlo approach for estimating white matter density in HARDI diffusion data. In Proceedings of the 18th International Society of Magnetic Resonance in Medicine (ISMRM) Scientific Meeting, Stockholm, Sweden, May 1-7 2010. [bibtex-entry]

  23. S. Rose, S. Crozier, P. Bourgeat, N. Dowson, O. Salvado, P. Raniga, K. Pannek, A. Coulthard, M. Fay, P. Thomas, and D. Macfarlane. Improved Delineation of Brain Tumour Margins using Whole-brain Track-Density Mapping. In Proceedings of the 19th International Society of Magnetic Resonance in Medicine (ISMRM) Scientific Meeting, Stockholm, Sweden, May 1-7 2010. [bibtex-entry]

  24. S. Rose, K. Pannek, O. Salvado, P. Raniga, F. Baumann, and R. Henderson. The FA Connectome: a Quantitative Strategy for Studying Neurological Disease Processes. In Proceedings of the 18th International Society of Magnetic Resonance in Medicine (ISMRM) Scientific Meeting, Stockholm, Sweden, May 1-7 2010. [bibtex-entry]

  25. C. Rowe, K. Ellis, G. Chételat, K. Pike, M. Rimajova, C. Szoeke, P. Bourgeat, O Salvado, R. Martins, C. Masters, D. Ames, V. Villemagne, and the AIBL Research Group. Baseline and follow-up neuroimaging results from the Australian Imaging, Biomarker, and Lifestyle flagship study of Ageing (AIBL). In 13th International Conference on Alzheimer's Disease, Honolulu, Hawaii, July 10-15 2010. . [bibtex-entry]

  26. Kaikai Shen, Pierrick Bourgeat, Jurgen Fripp, Fabrice Meriaudeau, David Ames, Kathryn A. Ellis, Colin L. Masters, Victor L. Villemagne, Christopher C. Rowe, and Olivier Salvado. Supervised method to build an atlas database for multi-atlas segmentation-propagation. In Nico Karssemeijer and Ronald M. Summers, editors, Medical Imaging 2010: Computer-Aided Diagnosis, volume 7624, San Diego, California, USA, pages 76241N--8 , March 2010. SPIE. [bibtex-entry]

  27. I. Svalbe, N. Normand, N. Nazareth, and S. Chandra. On constructing minimal ghosts. In Proceedings of the Digital Image Computing Techniques and Applications (DICTA) Conference, volume Sydney, pages 1-3 December, 2010. [bibtex-entry]

  28. D. Xiao, D. Zahra, P. Bourgeat, P. Berghofer, O. Acosta , C. Winberley, M.C. Gregoire, and O. Salvado. A non-rigid registration approach for mouse whole body skeleton registration. In Proc. of SPIE, Medical Imaging 2010: Bimedical Applications in Melecular, Structural, and Functional Imaging, San Diego, USA, pages 76261N, February 2010. [bibtex-entry]

  29. D. Xiao, D. Zahra, P. Bourgeat, P. Berghofer, O. Acosta , C. Winberley, M.C. Gregoire, and O. Salvado. An improved 3D shape context registration method for non-rigid surface registration. In Proc. of SPIE, Medical Imaging 2010: Image Processing, San Diego, USA, pages 76232Q, February 2010. [bibtex-entry]

  30. Min Xiong, Isabelle Milleville, Cedric Dumas, and Richard Palluel-Germain. Learning Chinese Handwriting with a Haptic Interface in different velocity mode. In Proceedings of the 2nd International Conference on Computer Supported Education, Valencia, Spain, pages 39--45 , April 2010. [bibtex-entry]

  31. L. Zhou, L. Wang, C. Shen, and N. Barnes. Hippocampal Shape Classification Using Redundancy Constrained Feature Selection. In Proceedings of International Conference on Medical Image Computing And Computer Assisted Intervention (MICCAI), pages 266--273, 2010. [bibtex-entry]

Miscellaneous

  1. Min Xiong, Isabelle Milleville, Cedric Dumas, and Richard Palluel-Germain. Experimental Evaluation of a Haptic and Visual Training Method for learning Chinese handwriting. poster , avril 2010.
    Note: VRIC 2010 : 12th Virtual Reality International Conference. [bibtex-entry]

  2. Imants Svalbe, Shekhar Chandra, Andrew Kingston, Nicolas Normand, and Jean-Pierre Guédon. Direct removal of image reconstruction artefacts caused by missing Finite Radon Transform projections.
    Note: In preparation, 2010. [bibtex-entry]

  3. Imants Svalbe, Shekhar Chandra, Andrew Kingston, Nicolas Normand, and Jean-Pierre Guédon. Unfolding summed prime length sequences for ghost projection based image reconstruction.
    Note: In preparation, 2010. [bibtex-entry]


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