Publications of Jurgen Fripp

Articles in journal or book chapters

1. O. Acosta, J. Fripp, V. Dore, P. Bourgeat, J-M. Favreau, G. Chételat, A. Rueda, V.L. Villemagne, C. Szoeke, D. Ames, K.A. Ellis, R.N. Martins, C.L. Masters, C.C. Rowe, E. Bonner, F. Gris, D. Xiao, P. Raniga, V. Barra, and O. Salvado. Cortical surface mapping using topology correction, partial flattening and 3D shape context-based non-rigid registration for use in quantifying atrophy in Alzheimer's disease. Journal of Neuroscience Methods, 205(1):96-109, March 2012. [bibtex-entry]


2. Kai-kai Shen, Jurgen Fripp, Fabrice Mériaudeau, Gaël Chételat, Olivier Salvado, and Pierrick Bourgeat. Detecting global and local hippocampal shape changes in Alzheimer's disease using statistical shape models. NeuroImage, 59(3):2155--2166, 2012. [bibtex-entry]


3. J.A. Dowling, J.A. Lambert, J. Parker, O. Salvado, J. Fripp, C. and Wratten, A. Capp, J.W. Denham, and P. Greer. An atlas-based electron-density mapping method for MRI-alone treatment planning and adaptive MRI-based prostate radiation therapy. International Journal of Radiation Oncology, Biology, Physics, in press , 2011. [bibtex-entry]


4. K.A. Ellis, C.C. Rowe, C. Szoeke, V.L. Villemagne, D. Ames, G. Chételat, R.N. Martins, C.L. Masters, J. Fripp, O. Acosta, P. Raniga, P. Bourgeat, and O. Salvado. Advances in structural and molecular neuroimaging in Alzheimer's disease. The Medical Journal of Australia, 194(4):S20--S23 , February 2011. [bibtex-entry]


5. P.B. Greer, J.A. Dowling, J.A. Lambert, J. Fripp, J. Parker, J.W. Denham, C. Wratten, A. Capp, and O. Salvado. A magnetic resonance imaging-based workflow for planning radiation therapy for prostate cancer. The Medical Journal of Australia, 194(4):S24-S27 , 2011. [bibtex-entry]


6. A. Neubert, O. Salvado, O. Acosta, P. Bourgeat, and J. Fripp. Constrained reverse diffusion for thick slice interpolation of 3D volumetric MRI images. Computerized Medical Imaging and Graphics, in press, 2011. [bibtex-entry]


7. David Raffelt, J-Donald Tournier, Jurgen Fripp, Stuart Crozier, Alan Connelly, and Olivier Salvado. Symmetric diffeomorphic registration of fibre orientation distributions. NeuroImage, 56(3):1171--1180 , June 2011.
   Note: PMID: 21316463. [bibtex-entry]


8. P. Bourgeat, G. Chételat, V. Villemagne, J. Fripp, P. Raniga, K. Pike, O. Acosta, C. Szoeke, S. Ourselin, D. Ames, K. Ellis, R. Martins, C. Masters, C. Rowe, O. Salvado, and the AIBL Research Group. AB burden in the temporal neocortex is related to hippocampal atrophy in elderly subjects without dementia. Neurology, 74(2):121--127, January 2010. [bibtex-entry]


9. C. Engstrom, J. Fripp, V. Jurcack, O. Salvado, and S. Crozier. Segmentation of the quadratus lumborum muscle using statistical shape modeling. Journal of MRI, 2010.
   Note: Accepted . [bibtex-entry]


10. J. Fripp, S. Crozier, S.K. Warfield, and S. Ourselin. Automatic Segmentation and Quantitative Analysis of the Articular Cartilages from Magnetic Resonance Images of the Knee. IEEE Transactions on Medical Imaging, 29(1):55-64 , January 2010. [bibtex-entry]


11. C. Rowe, K. Ellis, M. Rimajova, P. Bourgeat, K.E. Pike, G. Jones, J. Fripp, H. Tochon-Danguy, L. Morandeau, G. O'Keefe, R. Price, P. Raniga, P. Robins, O. Acosta, N. Lenzo, C. Szoeke, O. Salvado, R. Head, R. Martins, C.L. Masters, D. Ames, and V.L. Villemagne. Amyloid imaging results from the Australian imaging, biomarkers and lifestyle study of ageing (AIBL). Neurobiology of Aging, 31(8):1275--1283, August 2010. [bibtex-entry]


12. Andrea Rueda, Oscar Acosta, Michel Couprie, Pierrick Bourgeat, Jurgen Fripp, Nicholas Dowson, Eduardo Romero, and Olivier Salvado. Topology-corrected segmentation and local intensity estimates for improved partial volume classification of brain cortex in MRI. Journal of Neuroscience Methods, 188(2):305-315, May 2010. [bibtex-entry]


13. Oscar Acosta, Pierrick Bourgeat, Maria A. Zuluaga, Jurgen Fripp, Olivier Salvado, and Sebastien Ourselin. Automated voxel-based 3D cortical thickness measurement in a combined Lagrangian-Eulerian PDE approach using partial volume maps. Medical Image Analysis, 13(5):730-743, October 2009. [bibtex-entry]


14. J. Fripp, P. Bourgeat, O. Acosta, P. Raniga, M. Modat, K.E. Pike, G. Jones, G. O'Keefe, C.L. Masters, D. Ames, K.A. Ellis, P. Maruff, J. Currie, V.L. Villemagne, C.C. Rowe, O. Salvado, and S. Ourselin. Appearance Modeling of 11C PiB PET images: Characterizing amyloid deposition in Alzheimer's disease, mild cognitive impairement and healthy aging. NeuroImage, 43(3):430-439, Novembre 2008. [bibtex-entry]


15. P. Raniga, P. Bourgeat, J. Fripp, O. Acosta, V. Villemagne, C. Rowe, C. Masters, G. Jones, G. O'Keefe, O. Salvado, and S. Ourselin. Automated [11]C-PiB Standardized Uptake Value Ratio. Academic Radiology, 15(11):1376-1389, November 2008. [bibtex-entry]


16. P. Bourgeat, J. Fripp, P. Stanwell, S Ramadan, and S. Ourselin. MR image segmentation of the knee bone using phase information. Medical Image Analysis, 11(4):325--335, July 2007. [bibtex-entry]


17. J. Fripp, P. Bourgeat, S. Crozier, and S.n Ourselin. Shape based segmentation of MRIs of the knee using phase and magnitude information. Academic Radiology, 14(10):1201--1208 , October 2007. [bibtex-entry]


18. J. Fripp, S. Crozier, S. Warfield, and S. Ourselin. Automatic segmentation of the bone and extraction of the bone-cartilage interface from magnetic resonance images of the knee. Physics in Medicine and Biology, 52(6):1617--1631 , March 2007. [bibtex-entry]

Conference articles

1. Shekhar Chandra, Jason Dowling, Kaikai Shen, Josien Pluim, Peter Greer, Olivier Salvado, and Jurgen Fripp. Automatic Segmentation of the Prostate in 3D Magnetic Resonance Images using Case Specific Deformable Models. In Proceedings of the Digital Image Computing Techniques and Applications (DICTA) Conference, volume To be presented, 2011. [bibtex-entry]


2. V. Doré, P. Bourgeat, J. Fripp, O. Acosta, G. Chetelat, C. Szoeke, K.A. Eliis, R.N. Martin, N. Lenzo, V. Villemagne, C.L. Master, D. Ames, C.C. Rowe, O. Salvado, and the AIBL Research Group. Cortical Thickness comparison between PiB-positive and PiB-negative Healthy Control patients. In In Alzheimer's Association International Conference in Alzheimer's Disease 2011, Paris, France, July 16-21 2011. Alzheimer's Association, Vol. 7, Issue 4, pp S210-S211, 2011 . [bibtex-entry]


3. V. Doré, J. Fripp, P. Bourgeat, O. Acosta, and O. Salvado. MRI Intensity Tissues Normalisation for Longitudinal Surface Based Analysis of the WM/GM Contrast, application to Alzheimer's Disease. In In Proceedings of the 19th International Society of Magnetic Resonance in Medicine (ISMRM) Scientific Meeting, Montreal, Canada, May 7-13 2011, 2011 . [bibtex-entry]


4. V. Doré, J. Fripp, P. Bourgeat, K. Shen, and O. Salvado. Surface-base Approach using a Multi-Scale EM-ICP Registration for Statistical Population Analysis. In In Proceedings of the Digital Image Computing Techniques and Applications (DICTA) Conference, to appear, 2011 . [bibtex-entry]


5. J.A. Dowling, J. Fripp, S. Chandra, J. Pluim, J. Lambert, J. Parker, J. Denham, P.B. Greer, and O. Salvado. Fast automatic multi-atlas segmentation of the prostate from 3D MR images. In MICCAI 2011 Workshop on Prostate Cancer Imaging: Image Analysis and Image-Guided Interventions, volume 6963 , pages 10-21, 2011. Springer LNCS. [bibtex-entry]


6. A. Neubert, J. Fripp, K. Shen, C. Engstrom, R. Schwarz, L. Lauer, O. Salvado, and S. Crozier. Automated segmentation of lumbar vertebral bodies and intervertebral discs from MRI using statistical shape models. In Proceedings of International Society for Magnetic Resonance in Medicine (ISMRM) Scientific Meeting, Montréal, Canada, May 2011. [bibtex-entry]


7. A. Neubert, J. Fripp, K. Shen, O. Salvado, R. Schwarz, L. Lauer, C. Engstrom, and S. Crozier. Automated 3D Segmentation of Vertebral Bodies and Intervertebral Discs from MRI. In Proceedings of the Digital Image Computing Techniques and Applications (DICTA) Conference, volume To be presented, 2011. [bibtex-entry]


8. Anthony Paproki, Jurgen Fripp, Olivier Salvado, Xavier Sirault, Scott Berry, and Robert Furbank. Automated 3D Segmentation and Analysis of Cotton Plants. In International Conference on Digital Image Computing: Techniques and Applications (DICTA), pages 555 -560, December 2011. [bibtex-entry]


9. Anthony Paproki, Jurgen Fripp, Xavier Sirault, Scott Berry, and Robert Furbank. Automated Plant Phenomics 3D Analysis. In International Plant Phenomics Network, 2nd International Plant Phenotyping Symposium, Book of Abstracts, pages 75, November 2011. [bibtex-entry]


10. P. Raniga, P. Schmitt, P. Bourgeat, J. Fripp, V. Villemagne, C. Rowe, and O. Salvado. Local Intensity Model: An Outlier Detection Framework With Applications To White Matter Hyperintensity Segmentation. In Biomedical Imaging: From Nano to Macro, 2011. ISBI 2011. 8th IEEE International Symposium on, Chicago, IL, March 2011. IEEE. [bibtex-entry]


11. Kaikai Shen, Pierrick Bourgeat, Jurgen Fripp, Fabrice Meriaudeau, and Olivier Salvado. Detecting hippocampal shape changes in Alzheimer's disease using statistical shape models. In Medical Imaging 2011: Image Processing, volume 7962, Lake Buena Vista, Florida, USA, pages 796243--7 , 2011. SPIE. [bibtex-entry]


12. Kaikai Shen, Jurgen Fripp, Fabrice Meriaudeau, Gaël Chetelat, Olivier Salvado, and Pierrick Bourgeat. Localization of hippocampal atrophy in Alzheimer's disease. In Alzheimer's Association International Conference in Alzheimer's Disease 2011, Paris, France , pages S17--S18, July 2011. [bibtex-entry]


13. Ying Xia, Shekhar Chandra, Olivier Salvado, Jurgen Fripp, Raphael Schwarz, Lars Lauer, Craig Engstrom, and Stuart Crozier. Automated Bone Segmentation and Bone-Cartilage Interface Extraction from MR Images of the Hip. In Submitted in the International Society for Magnetic Resonance in Medicine (ISMRM) Conference, 2011. [bibtex-entry]


14. Ying Xia, Shekhar Chandra, Olivier Salvado, Jurgen Fripp, Raphael Schwarz, Lars Lauer, Craig Engstrom, and Stuart Crozier. Automated MR Hip Bone Segmentation. In Proceedings of the Digital Image Computing Techniques and Applications (DICTA) Conference, 2011. [bibtex-entry]


15. Oscar Acosta, Jurgen Fripp, Andrea Rueda, Di Xiao, Erik Bonner, Pierrick Bourgeat, and Olivier Salvado. 3D shape context surface registration for cortical mapping. In 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Rotterdam, The Netherlands, pages 1021--1024, 14-17 April 2010 . IEEE. [bibtex-entry]


16. Neil Burdett, Jurgen Fripp, Pierrick Bourgeat, and Olivier Salvado. MILXView: A Medical Imaging, Analysis and Visualization Platform. In IFIP Advances in Information and Communication Technology, volume 335, pages 177, 2010. Springer. [bibtex-entry]


17. J. Dowling, J. Lambert, J. Parker, J. Fripp, J. Denham, C. Wratten, P. Bourgeat, C Tang, O. Salvado, and P.B. Greer. Feasibility of Atlas Based Organ Segmentation and Electron Density Mapping for MRI Based Prostate Radiation Therapy Planning. In Fifty sixth annual meeting of the Canadian Organization of Medical Physicists and the Canadian College of Physicists in Medicine, volume 37 , pages 3907, 2010. Medical Physics. [bibtex-entry]


18. J. Dowling, J. Lambert, J. Parker, P.B. Greer, J. Fripp, J. Denham, S. Ourselin, and O. Salvado. Automatic MRI atlas-based external beam radiation therapy treatment planning for prostate cancer. In MICCAI 2010 Workshop on Prostate Cancer Imaging: Computer-Aided Diagnosis, Prognosis, and Intervention, volume 6367 , pages 25-33, 2010. Springer LNCS. [bibtex-entry]


19. Kelvin Leung, Kai-Kai Shen, Josephine Barnes, Gerard Ridgway, Matthew Clarkson, Jurgen Fripp, Olivier Salvado, Fabrice Meriaudeau, Nick Fox, Pierrick Bourgeat, and Sébastien Ourselin. Increasing Power to Predict Mild Cognitive Impairment Conversion to Alzheimer's Disease Using Hippocampal Atrophy Rate and Statistical Shape Models. In Tianzi Jiang, Nassir Navab, Josien Pluim, and Max Viergever, editors, Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2010, volume 6362 of Lecture Notes in Computer Science, pages 125-132, 2010 . Springer. [bibtex-entry]


20. David Raffelt, J-Donald Tournier, Jurgen Fripp, Stuart Crozier, Alan Connelly, and Olivier Salvado. Symmetric Diffeomorphic Normalisation of Fibre Orientation Distributions. In Proceedings of International Society for Magnetic Resonance in Medicine, Stockholm, Sweden, May 2010 . [bibtex-entry]


21. P. Raniga, J. Fripp, O. Acosta, P. Bourgeat, C Szoeke, G O'Keefe, K. Ellis, R. Martins, G Chetelat, V. Villemagne, C. Masters, D. Ames, C. Rowe, and O. Salvado. Effects of partial volume correction on the analysis of 11C-PiB PET in assessing Alzheimer's disease. In Alzheimer's Association International Conference in Alzheimer's Disease 2010, Honolulu, USA, July 10-15 2010. Alzheimer's Association . [bibtex-entry]


22. P. Raniga, K. Pannek, J. Fripp, D. Raffelt, P. Bourgeat, O. Acosta, D. Tournier, A. Connelly, S. Rose, and O. Salvado. A Monte-Carlo approach for estimating white matter density in HARDI diffusion data. In Proceedings of the 18th International Society of Magnetic Resonance in Medicine (ISMRM) Scientific Meeting, Stockholm, Sweden, May 1-7 2010. [bibtex-entry]


23. Kaikai Shen, Pierrick Bourgeat, Jurgen Fripp, Fabrice Meriaudeau, David Ames, Kathryn A. Ellis, Colin L. Masters, Victor L. Villemagne, Christopher C. Rowe, and Olivier Salvado. Supervised method to build an atlas database for multi-atlas segmentation-propagation. In Nico Karssemeijer and Ronald M. Summers, editors, Medical Imaging 2010: Computer-Aided Diagnosis, volume 7624, San Diego, California, USA, pages 76241N--8 , March 2010. SPIE. [bibtex-entry]


24. Erik Bonner, Oscar Acosta, Jurgen Fripp, and Olivier Salvado. A Quantitative Comparison of Three Methods For Inflating Cortical Meshes. In 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Boston, Massachusetts, USA, pages 1338-1341, June 2009 . IEEE. [bibtex-entry]


25. P. Bourgeat, V. Villemagne, J. Fripp, K. Pike, P. Raniga, O. Acosta, C. Szoeke, S. Ourselin, D. Ames, K. Ellis, C. Masters, C. Rowe, and O. Salvado. Relation between amyloid burden, brain atrophy and cognition in Alzheimer's disease. In 12th International Conference on Alzheimer's Disease, Vienna, Austria, July 11-16 2009. . [bibtex-entry]


26. J. Dowling, P. Bourgeat, D. Raffelt, J. Fripp, P. B. Greer, J. Patterson, J. Denham, S. Gupta, C. Tang, P. Stanwell, S. Ourselin, and O. Salvado. Nonrigid correction of interleaving artefacts in pelvic MRI. In Josien P. W. Pluim and Benoit M. Dawant, editors, Proceedings of SPIE Medical Imaging 2009: Image Processing, Florida, volume 7259, pages 72592P, 2009. SPIE. [bibtex-entry]


27. J. Dowling, P. Fripp, J. Greer, J. Patterson, S. Ourselin, and O. Salvado. Automatic atlas-based segmentation of the prostate: A MICCAI 2009 Prostate Segmentation Challenge entry. In Proceedings of 2009 MICCAI Prostate Segmentation Challenge (London, September 2009), 2009. [bibtex-entry]


28. J. Fripp, P. Bourgeat, C. Engstrom, S. Ourselin, S. Crozier, and O. Salvado. Automated Segmentation of the Menisci From MR Images. In 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Boston, Massachusetts, USA, pages 510-513, June 2009. [bibtex-entry]


29. J. Fripp, V. Villemagne, P. Bourgeat, P. Raniga, O. Acosta, C. Szoeke, D. Ames, K.A. Ellis, C.L. Masters, C. Rowe, and O. Salvado. Characterizing 11C PiB PET Images.. In 12th International Conference on Alzheimer's Disease, 2009.
    Note: Accepted. [bibtex-entry]


30. David Raffelt, Jacques-Donald Tournier, Jurgen Fripp, Stuart Crozier, Alan Connelly, and Olivier Salvado. Spatial Normalization of High Angular Resolution Diffusion Imaging Data using Fiber Orientation Distributions. In Diffusion Workshop, London, United Kingdom, September 2009 . [bibtex-entry]


31. D. Raffelt, D. Tournier, J. Fripp, N. Lepore, S. Crozier, A. Connelly, and O. Salvado. Non-Rigid Registration of Diffusion Weighted Images using Fibre Orientation Distributions. In Proceedings of ISMRM, Honolulu, Hawaii, April 18-24 2009 . [bibtex-entry]


32. Parnesh Raniga, Pierrick Bourgeat, Jurgen Fripp, Oscar Acosta, Sebastien Ourselin, Christopher Rowe, Victor L Villemagne, and Olivier Salvado. Alzheimers disease detection using 11C-PiB with improved partial volume effect correction. In SPIE: Medical Imaging, Lake Buena Vista, FL, USA, 2009. SPIE. [bibtex-entry]


33. P. Raniga, V. Villemagne, J. Fripp, P. Bourgeat, O. Acosta, C Szoeke, S. Ourselin, D. Ames, K. Ellis, C. Masters, O. Salvado, and C. Rowe. Correlation between white matter hyperintensities in MRI-FLAIR and 11C-PiB PET retention. A new potential for early identification of disease. In Alzheimer's Association International Conference in Alzheimer's Disease 2009, Vienna, Austria, July 11-16 2009. Alzheimer's Association. [bibtex-entry]


34. Andrea Rueda, Oscar Acosta, Pierrick Bourgeat, Jurgen Fripp, Nicholas Dowson, Michel Couprie, Eduardo Romero, and Olivier Salvado. Partial Volume Estimation orf Brain Cortex From MRI Using Topology-Corrected Segmentation. In 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Boston, Massachusetts, USA, pages 133-136, June 2009 . IEEE. [bibtex-entry]


35. D. Xiao, P. Bourgeat, J. Fripp, O. Acosta, M.C. Gregoire , and O. Salvado. Non-rigid registration of small animal skeletons from micro-CT using 3D shape context. In Proc. of SPIE, Medical Imaging 2009: Image Processing, volume 7259, pages 72591G, 2009. [bibtex-entry]


36. D. Xiao, D. Zahra, P. Bourgeat, J. Fripp, P. Berghofer , O. Acosta, M.C. Gregoire, and O. Salvado. Hybrid non-rigid registration method for registering rat skeletons from micro-CT images. In SNM 2009 Annual Meeting, Toronto, Canada, June 2009. [bibtex-entry]


37. Oscar Acosta, Pierrick Bourgeat, Jurgen Fripp, Erik Bonner, Sebastien Ourselin, and Olivier Salvado. Automatic delineation of sulci and improved partial volume classification for accurate 3D cortical thickness estimation from MR. In 11th International Conference on Medical Image Computing and Computer-Assisted Interventions (MICCAI 2008), LNCS, New York, USA, pages 253-261, September 2008 . SPRINGER. [bibtex-entry]


38. P. Bourgeat, O. Acosta, J. Fripp, C. Masters, C. Rowe, V. Villemagne, S. Ourselin, and O. Salvado. New cortical thickness estimation method for atrophy characterization of Alzheimer's disease patients. In 11th International Conference on Alzheimer's Disease, Chicago, Il, July 26-31 2008. . [bibtex-entry]


39. P. Bourgeat, O. Acosta, J. Fripp, C. Masters, C. Rowe, V. Villemagne, O. Salvado, and S. Ourselin. Cortical thickness estimation of Alzheimer's disease patients: Application to the Australian Imaging Biomarkers and Lifestyle (AIBL) study. In 14th Annual Meeting of the Organization for Human Brain Mapping, Melbourne, Australia, June 15-19 2008. Organization for Human Brain Mapping . [bibtex-entry]


40. P. Bourgeat, O. Acosta, M. Zuluaga, J. Fripp, O. Salvado, and S. Ourselin. Improved cortical thickness measurement from MR images using partial volume estimation. In IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Paris, France, pages 205-208 , April 2008. IEEE. [bibtex-entry]


41. J. Dowling, P. Bourgeat, D. Raffelt, J. Fripp, P. Greer, J. Patterson, J. Denham, P. Stanwell, S. Ourselin, and O. Salvado. Fast automatic correction of non-rigid motion artefacts in MRI of the abdomen. In Proceedings of MICCAI Prostate Workshop (New York, September 2008), 2008. [bibtex-entry]


42. K.A. Ellis, V.L. Villemagne, D. Ames, N. Lenzo, K.E. Pike , G. O'Keefe, H. Tochon-Danguy, R. Price, G. Jones, M. Rimajova , P. Bourgeat, P. Raniga, J. Fripp, O. Acosta, O. Salvado , R. Martins, C.L. Masters, and C.C. Rowe. The Australian biomarker, imaging and lifestyle study: Preliminary PiB results. In 11th International Conference on Alzheimer's Disease, Chicago, Il, July 26-31 2008. . [bibtex-entry]


43. S.G.H. Erbou, S. Darkner, J. Fripp, S. Ourselin, and B.K. Ersboll. ESTIMATION OF SHAPE MODEL PARAMETERS FOR 3D SURFACES. In International Symposium on Biomedical Imaging: From Nano to Macro, Paris, France, pages 624-627, May 2008 . IEEE. [bibtex-entry]


44. J. Fripp, P. Bourgeat, O. Acosta, G. Jones, V. Villemagne, S. Ourselin, C. Rowe, and O. Salvado. Generative atlases and atlas selection for C11-PIB PET-PET registration of Elderly, Mild cognitive impaired and Alzheimer disease patients. In International Symposium on Biomedical Imaging: From Nano to Macro, Paris, France, pages 1155-1158, May 2008 . IEEE. [bibtex-entry]


45. J. Fripp, P. Bourgeat, P. Raniga, O. Acosta, C. Masters, C. Rowe, V. Villemagne, S. Ourselin, and O. Salvado. Modeling the appearance variation of 11C-PiB PET images.. In 11th International Conference on Alzheimer's Disease, Chicago, Il, July 26-31 2008. [bibtex-entry]


46. J. Fripp, P. Bourgeat, P. Raniga, O Acosta, V. Villegmane, G. O'keefe, G. Jones, C. Rowe, S. Ourselin, and O. Salvado. MR-less high dimensional spatial normalization of 11C PiB PET images on a population of Elderly, Mild cognitive impaired and Alzheimer disease patients. In 11th International Conference on Medical Image Computing and Computer Assisted Intervention, pages 442-449 , 2008. [bibtex-entry]


47. J. Fripp, V. Jurcak, R. Holt, S. Ourselin, C. Engstom, and S. Crozier. Reproducibility of Automatic Quantitative Analysis of the Articular Cartilages from MEDIC and weDESS Magnetic Resonance Images of the Knee at 1.5T. In , Toronto, May 2008 .
    Note: Accepted for publication. [bibtex-entry]


48. V. Jurcak, J. Fripp, C. Engstrom, D. Walker, O. Salvado, S. Ourselin, and S. Crozier. ATLAS BASED AUTOMATED SEGMENTATION OF THE QUADRATUS LUMBORUM MUSCLE USING NON-RIGID REGISTRATION ON MAGNETIC RESONANCE IMAGES OF THE THORACOLUMBAR REGION. In International Symposium on Biomedical Imaging: From Nano to Macro, Paris, France, pages 113-116, May 2008 . IEEE. [bibtex-entry]


49. V. Jurcak, J. Fripp, E. Engstrom, D. Walker, O Salvado, S. Ourselin, and S Crozier. Automated segmentation of the quadratus lumborum muscle from Magnetic Resonance Images using a hybrid atlas based - Geodesic active contour scheme. In EMBC, 2008. [bibtex-entry]


50. P. Raniga, J. Fripp, P. Bourgeat, O. Acosta, S. Ourselin, C. Masters, D. Ames, P. Hudson, C. Rowe, V. Villemagne, and O. Salvado. Optimization Of Partial Volume Correction Strategies for [11]C-PiB Quantification. In Alzheimer's Association International Conference in Alzheimer's Disease 2008, Chicago, IL, July 26-31 2008. Alzheimer's Association. [bibtex-entry]


51. P. Raniga, J. Fripp, P. Bourgeat, O. Acosta, V. Villemagne, C. Rowe, C. Masters, O. Salvado, and S. Ourselin. Automated Standardized Uptake Value Ratio of 11C-PIB PET analysis in Alzheimers disease. In 14th Annual Meeting of the Organization for Human Brain Mapping, Melbourne, Australia, June 15-19 2008. Organization for Human Brain Mapping.
    Note: CD-ROM paper number 345 W-AM . [bibtex-entry]


52. J. Fripp, P. Bourgeat, S. Crozier, and S. Ourselin. Shape-based segmentation of MRIs of the bones in the knee. In SPIE: Medical Imaging, volume 6512, San Diego, CA, USA, pages 651212, February 2007 . SPIE. [bibtex-entry]


53. J Fripp, S Crozier, S.K Warfield, and S. Ourselin. Automatic Segmentation of Articular Cartilage in Magnetic Resonance Images of the Knee. In 10th International Conference on Medical Image Computing and Computer Assisted Intervention, Brisbane, Australia, pages 186-194, October 2007. [bibtex-entry]


54. J. Fripp, S. Crozier, S.K. Warfield, and S. Ourselin. Automatic segmentation of the knee bones using 3D active shape models. In International Symposium on Biomedical Imaging: From Nano to Macro, Washington, pages 336-339, April 2007 . IEEE. [bibtex-entry]


55. P. Bourgeat, J. Fripp, P. Stanwell, S. Ramadan, and S. Ourselin. MR image segmentation using phase information and a novel multiscale scheme. In 9th International Conference on Medical Image Computing And Computer-Assisted Intervention (MICCAI'06), volume 4191 of LNCS, Copenhagen, Denmark, pages 920--927, October 1-6 2006 . Springer. [bibtex-entry]


56. J. Fripp, S. Crozier, S.K. Warfield, and S. Ourselin. A subdivision-based parametric deformable model for surface extraction and statistical shape modeling of the knee cartilages. In SPIE: Medical Imaging, volume 6141, San Diego, CA, USA, pages 622-631, March 2006 . SPIE. [bibtex-entry]


57. J. Fripp, S. Crozier, S.K. Warfield, and S. Ourselin. Automatic segmentation of the knee bones using 3D active shape models. In International Conference of Pattern Recognition, volume 1, Hong Kong, pages 167-170, August 2006 . [bibtex-entry]


58. P. Bourgeat, J. Fripp, A. Janke, G. Galloway, S. Crozier, and S. Ourselin. The use of unwrapped phase in MR image segmentation: A preliminary study. In 8th International Conference on Medical Image Computing And Computer-Assisted Intervention (MICCAI'05), volume 3750 of LNCS, Palm Springs, California, pages 813-820, October 26-29 2005 . Springer Verlag. [bibtex-entry]


59. J. Fripp, P. Bourgeat, A.U.J Mewes, S.K. Warfield, S. Crozier, and S. Ourselin. 3D statistical shape models to embed spatial relationship information. In Computer Vision for Biomedical Image Applications: Current techniques and future trends, an ICCV workshop, volume 3765 of LNCS, Beijing, China, pages 51-60, October 2005 . Springer Verlag. [bibtex-entry]


60. J. Fripp, S. Crozier, S.K. Warfield, and S. Ourselin. Automatic Initialization of 3D Deformable Models for Cartilage Segmentation.. In DICTA, pages 74, 2005. [bibtex-entry]


61. J. Fripp, S. Ourselin, S. Warfield, A. Mewes, and S. Crozier. Automatic Generation of 3D Statistical Shape Models of the Knee Bones. In APRS Workshop on Digital Image Computing, pages 15--21, February 2005. [bibtex-entry]

Miscellaneous

1. Chuong Nguyen, Paul Jackway, Ron Li, Changming Sun, David Lovell, Xavier Sirault, Scott Berry, Robert Furbank, Anthony Paproki, Jurgen Fripp, and John LaSalle. Image analysis for Accelerated Phenomics. , October 2011. [Abstract] [bibtex-entry]